DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and kvs-4

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001367099.1 Gene:kvs-4 / 190011 WormBaseID:WBGene00012967 Length:539 Species:Caenorhabditis elegans


Alignment Length:123 Identity:25/123 - (20%)
Similarity:55/123 - (44%) Gaps:29/123 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   756 RGSMHGLSILAPILLCFSMMIIYIVFGAAVLYRLEK-------WPILDGIYFCFMSLSTIGFGDM 813
            :.|...|.::|.:::      ..::|.:.::|.|||       ..|....::|.::::|:|:||:
 Worm   414 KASFRQLGMMAMVVM------TGVIFFSTLVYFLEKDEPASKFHSIPAACWWCIVTMTTVGYGDL 472

  Fly   814 ----LPGLRRESNATTWFCSVYIMSGMTLTAMCFNVIHEEIVHRIRIVVEFKKTSAAN 867
                :||....:.|..  |.|.::: :.:|.         ||.....|.|.::.:..|
 Worm   473 TPVTVPGKLVATGAIA--CGVLVLA-LPITI---------IVDNFMKVAETERPAGGN 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168
Ion_trans <601..640 CDD:278921
Ion_trans_2 774..846 CDD:285168 17/82 (21%)
kvs-4NP_001367099.1 BTB_POZ_Kv 121..208 CDD:349626
Ion_trans 265..513 CDD:395416 24/116 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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