DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-40

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001255206.1 Gene:twk-40 / 189006 WormBaseID:WBGene00006691 Length:436 Species:Caenorhabditis elegans


Alignment Length:495 Identity:103/495 - (20%)
Similarity:186/495 - (37%) Gaps:167/495 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 PHQQQQQHQAVQGRHADNDT---MAA----AAAAVAAQGTLAGSASAGGLNPFGQPASSGEFVYG 455
            |..|:..|:..|.::.::.|   ||.    |...:|....:..|....|...|        ..|.
 Worm    21 PMHQRHYHRREQDQNENDITSRPMATWKTYARIILAHVSLIVLSVVYVGFGAF--------LFYQ 77

  Fly   456 LDGMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVS---------LNILYKENWTKLAALE 511
            |:..:..::.|..:.:|.:.      :::.||::|::..|         |.:.|.:|.|::.   
 Worm    78 LEQPNEVEVRARNIERFNIH------KRQMIEHLWEMRESGIGQHVVEDLAVKYVDNVTRIL--- 133

  Fly   512 IAKFQDQLIKRLNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLH 576
            ...|....|                                     ||.                
 Worm   134 FEAFDTHCI-------------------------------------GAK---------------- 145

  Fly   577 THYHHHRAGGVGGVAVGGGPPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIP 641
                |.|.|       |....:.|.:..|..::.|:||||||||:.|.|..|:::.:.||.||:|
 Worm   146 ----HLRPG-------GEDEDYNWTYMTALFFTTTLLTTIGYGNLTPVTGRGKLLCILYALFGVP 199

  Fly   642 LTLVYLSSTGSILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAV 706
            |.|:.::..|..|:....::              |..|         |::|.|..:::       
 Worm   200 LILITVADIGKFLSENIVQL--------------YTWY---------RKLREKCSKQK------- 234

  Fly   707 MQEPYYVRDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLC 771
                      :.....||      ..|..|.:       ::|.|.        :.:||  ||.|.
 Worm   235 ----------YSVISSKD------DKNKEGDL-------NLDHLE--------NYISI--PIFLI 266

  Fly   772 FSMMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWFCSVYIMSGM 836
            .::::.||.|||.||...|.|....|.||.|::::|:||||::| |:||..... .|  ||:.|:
 Worm   267 VAILLSYITFGAVVLSMWEGWDFFSGFYFSFITMTTVGFGDIVP-LKREYYILD-LC--YIIIGL 327

  Fly   837 TLTAMCFNVIHEEIVHRIRI---VVEFKKTSAANSGGGLI 873
            ::|.||.:::..:.:.::..   .::..:.:..|.||.::
 Worm   328 SITTMCIDLVGIQYIRKMHYFGRAIKDARFALVNVGGKMV 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 23/56 (41%)
Ion_trans <601..640 CDD:278921 16/38 (42%)
Ion_trans_2 774..846 CDD:285168 29/71 (41%)
twk-40NP_001255206.1 Ion_trans_2 <174..214 CDD:285168 17/39 (44%)
Ion_trans_2 269..343 CDD:285168 29/77 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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