DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-30

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_492381.3 Gene:twk-30 / 185335 WormBaseID:WBGene00006682 Length:608 Species:Caenorhabditis elegans


Alignment Length:416 Identity:88/416 - (21%)
Similarity:149/416 - (35%) Gaps:141/416 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 LDGMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQDQLI 520
            |:|.....|:...|.:...:...|      ::.:|.:.......||.             .:.||
 Worm    29 LEGEHLDALKKDHMAKIEQNAKDY------VDKLWSVAKRDRDKYKN-------------VEDLI 74

  Fly   521 KRLNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLHTHYHHHRAG 585
            |.:.||.:     ||..:                                   .:.|.::.||  
 Worm    75 KSVKEDTV-----DDFND-----------------------------------YVDTVFYAHR-- 97

  Fly   586 GVGGVAVGGGPPHE---WNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYL 647
                 ||..|...:   |:||.:..::.|:||:||||.|||.|..||:..:.|...|||||||.:
 Worm    98 -----AVRHGYDEDSPTWDFANSVFFTTTMLTSIGYGYVAPSTFGGRLFGVIYCLIGIPLTLVTV 157

  Fly   648 SSTGSILAR----VAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQ 708
            ::....|:.    :..|:::|.|                       ..:|||:.|       |..
 Worm   158 ANVAKFLSETIFFLHYELWNKCL-----------------------EWKRKRKGE-------VEA 192

  Fly   709 EPYYVRDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFS 773
            :|  ::.:|                           ||.::......|..:    :..|.|..|.
 Worm   193 DP--LQPMF---------------------------GDDENEEEILDRVRL----VRFPPLTVFF 224

  Fly   774 MMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWFCSVYIMSGMTL 838
            .:.:|....|.|:...|.|..::.:||.|:|:.|:||||:.|     |....|....:::.|:.|
 Worm   225 FVFVYGCIAAWVVRYWETWTYVESLYFIFISILTVGFGDIRP-----SPGNIWVTLAFVVVGVIL 284

  Fly   839 TAMCFNVIHEEIVHRIRIVVEFKKTS 864
            |.||.:|:....:..|..:....|:|
 Worm   285 TTMCMDVVGRMYLKEIHYLGRKLKSS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 25/59 (42%)
Ion_trans <601..640 CDD:278921 16/38 (42%)
Ion_trans_2 774..846 CDD:285168 22/71 (31%)
twk-30NP_492381.3 Ion_trans_2 103..166 CDD:285168 25/62 (40%)
Ion_trans_2 224..298 CDD:285168 23/78 (29%)
FN3 379..469 CDD:238020
FN3 475..565 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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