DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-30

DIOPT Version :10

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_492381.3 Gene:twk-30 / 185335 WormBaseID:WBGene00006682 Length:608 Species:Caenorhabditis elegans


Alignment Length:416 Identity:88/416 - (21%)
Similarity:149/416 - (35%) Gaps:141/416 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 LDGMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQDQLI 520
            |:|.....|:...|.:...:...|      ::.:|.:.......||.             .:.||
 Worm    29 LEGEHLDALKKDHMAKIEQNAKDY------VDKLWSVAKRDRDKYKN-------------VEDLI 74

  Fly   521 KRLNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLHTHYHHHRAG 585
            |.:.||.:     ||..:                                   .:.|.::.||  
 Worm    75 KSVKEDTV-----DDFND-----------------------------------YVDTVFYAHR-- 97

  Fly   586 GVGGVAVGGGPPHE---WNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYL 647
                 ||..|...:   |:||.:..::.|:||:||||.|||.|..||:..:.|...|||||||.:
 Worm    98 -----AVRHGYDEDSPTWDFANSVFFTTTMLTSIGYGYVAPSTFGGRLFGVIYCLIGIPLTLVTV 157

  Fly   648 SSTGSILAR----VAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQ 708
            ::....|:.    :..|:::|.|                       ..:|||:.|       |..
 Worm   158 ANVAKFLSETIFFLHYELWNKCL-----------------------EWKRKRKGE-------VEA 192

  Fly   709 EPYYVRDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFS 773
            :|  ::.:|                           ||.::......|..:    :..|.|..|.
 Worm   193 DP--LQPMF---------------------------GDDENEEEILDRVRL----VRFPPLTVFF 224

  Fly   774 MMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWFCSVYIMSGMTL 838
            .:.:|....|.|:...|.|..::.:||.|:|:.|:||||:.|     |....|....:::.|:.|
 Worm   225 FVFVYGCIAAWVVRYWETWTYVESLYFIFISILTVGFGDIRP-----SPGNIWVTLAFVVVGVIL 284

  Fly   839 TAMCFNVIHEEIVHRIRIVVEFKKTS 864
            |.||.:|:....:..|..:....|:|
 Worm   285 TTMCMDVVGRMYLKEIHYLGRKLKSS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:462301 25/59 (42%)
Ion_trans_2 774..846 CDD:462301 22/71 (31%)
twk-30NP_492381.3 Ion_trans_2 103..166 CDD:462301 25/62 (40%)
Ion_trans_2 221..298 CDD:462301 24/81 (30%)
FN3 <372..>565 CDD:442628
Blue background indicates that the domain is not in the aligned region.

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