DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-47

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001309491.1 Gene:twk-47 / 185227 WormBaseID:WBGene00018002 Length:500 Species:Caenorhabditis elegans


Alignment Length:300 Identity:65/300 - (21%)
Similarity:115/300 - (38%) Gaps:59/300 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 YHHHR--AGGVGGVAVGGGPPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIP 641
            ||..|  ...:.|::....|| .|....:.||:|::|||.||....|.|.:|:...:.|...|||
 Worm   103 YHEGREFKSTISGISDDALPP-RWTKRSSILYALSILTTTGYAYAVPVTPIGQCFAIIYGLVGIP 166

  Fly   642 LTLVYLSSTGSILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAV 706
            :.::.....|..|:.:..|::||           |.....|....|...:.|.|.::|.|:..|.
 Worm   167 MMVLAAVDFGRFLSHIVLELYSK-----------YLDLVHKLKIMKTVILERHRARDEKRRLHAF 220

  Fly   707 MQEPYYVRD----VFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAP 767
            .:   .|:|    :...|.:||.                 .|.:..:..:.|.......|.|.|.
 Worm   221 KR---LVQDTGSTISECTTQKDV-----------------QLEEEQTTDSDEMPEKRLPLVINAS 265

  Fly   768 ILLCFSMM--IIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESN--ATTWFC 828
            |||.|.|:  ::||..|....:       ::..:..|..::.:...:|    ..|.|  .|..:.
 Worm   266 ILLIFCMLGGVLYIAAGGRATF-------IESFFLTFNLVANLTMSEM----PNELNHILTIIYI 319

  Fly   829 SVYIMSGMTLTAMCFNVIHEEI------VHRIRIVVEFKK 862
            .|::..|:.:.:|...:...|:      :|.....:.||:
 Worm   320 FVFVTCGVAVLSMSAELAALELKELFMKIHYFGRRINFKR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 18/56 (32%)
Ion_trans <601..640 CDD:278921 12/38 (32%)
Ion_trans_2 774..846 CDD:285168 12/75 (16%)
twk-47NP_001309491.1 Ion_trans_2 <124..180 CDD:369572 17/55 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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