DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-28

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_508732.3 Gene:twk-28 / 183714 WormBaseID:WBGene00006680 Length:523 Species:Caenorhabditis elegans


Alignment Length:406 Identity:95/406 - (23%)
Similarity:160/406 - (39%) Gaps:94/406 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   600 WNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVAREVFSK 664
            |.|..:..::.||:|||||||:.|.|..||:..:.:|..||||.||.::..|..|        |:
 Worm   166 WTFPNSMFFAATVITTIGYGNLVPITVTGRVACIIFALLGIPLLLVTIADIGKFL--------SE 222

  Fly   665 ALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDVFHATPEKDAGAGA 729
            .|.....|..|:    ::::..:.:::..:.:.:...:..:||                      
 Worm   223 FLSYLYRSYRGF----KRKLRRQSKKITSQYRSQSQSRSSSVM---------------------- 261

  Fly   730 PPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMMIIYIVFGAAVLYRLEKWPI 794
                .....||: .|.|||| .:.:|.|.    .:..|:.:...:::.|...|..:....|....
 Worm   262 ----GSSKAGSM-NLHDIDS-DSEDSAGD----ELRIPVFMVLLVLLAYTAIGGFLFQSWEHLEY 316

  Fly   795 LDGIYFCFMSLSTIGFGDMLPGLRRESNATTWFCSVYIMSGMTLTAMCFNVIHEEIVHRIRIVVE 859
            .:..||||::::|:||||::|    ......:|...||:.|::|..||.::...|.:.:|    .
 Worm   317 FEAFYFCFITMATVGFGDIVP----NEQVYVFFTMAYIIFGLSLATMCIDLAGTEYIRKI----H 373

  Fly   860 FKKTSAANSGG----GLIGGGSVSGGAG-----GAGGSMMDV---------AHEEGGQYYVPASX 906
            :..|...::.|    ||..|..:....|     .|||.::.|         |.|.|..|.:  . 
 Worm   374 YLGTKMEDAKGAVMTGLQAGEHLLKHTGIEVIKTAGGKLVQVRGAVLSSKEARELGMSYLL--QF 436

  Fly   907 HYEKRGHLYQRNPTEETLVTDTPTSLVLKDYVNHELVPILTMDPNGARLAPTPAPAYTPANTSTG 971
            :|:.:..||:            |.:..|...|....:.||..|       .|....|...|.|..
 Worm   437 NYQHKNVLYE------------PLTGNLAKVVKEANIKILPDD-------ITEKDGYIVQNKSYD 482

  Fly   972 MPGSGE---VTTPGNS 984
            .|..||   |...||:
 Worm   483 RPVLGERGFVRLNGNA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 24/55 (44%)
Ion_trans <601..640 CDD:278921 15/38 (39%)
Ion_trans_2 774..846 CDD:285168 20/71 (28%)
twk-28NP_508732.3 Ion_trans_2 <166..222 CDD:285168 24/63 (38%)
Ion_trans_2 295..370 CDD:285168 21/78 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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