DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42594 and twk-39

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001076639.1 Gene:twk-39 / 182864 WormBaseID:WBGene00006690 Length:676 Species:Caenorhabditis elegans


Alignment Length:486 Identity:97/486 - (19%)
Similarity:143/486 - (29%) Gaps:245/486 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 PPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVARE 660
            |..:|.|:.|.|||:||.||||||::.|:|..||::|:.|:..||||.|:.|::....||:|...
 Worm   117 PTFQWTFSGALLYSITVFTTIGYGHICPKTDTGRLLTILYSILGIPLMLLCLANIAETLAQVFTY 181

  Fly   661 VFSKALCCCLC---------------------------------SNCGY---------------- 676
            ::.| |||..|                                 ||..|                
 Worm   182 IYFK-LCCAYCRWQKNRRRVRRAALSFRYHPNAAVNVRRVQSSRSNQRYNTVRRHASLNRSRTRS 245

  Fly   677 ----------------------------------------------------------------- 676
                                                                             
 Worm   246 NDTKSVRSFNRYDSTNTQPVQPPRFDTMSLPGRRKISTQSRSPNGTMPRLPNFPQPKRGAHLQKS 310

  Fly   677 --------CCYDEKR------------------------------------------------MA 685
                    ...||||                                                :.
 Worm   311 NTAINMEQLYTDEKRSRRGRHAVSESPAREYKGGLLVRAQHQPDEGVVDLKAYGGSAAAFHDLVT 375

  Fly   686 EKERR-----------------------------------------MRRKRQQEELRKQQAVMQE 709
            .|.||                                         .||.....|||:::.:|  
 Worm   376 RKPRRDDAAVPNVIISRTRDEDVKSDPDKTEETSMSLTDDEDMQKPPRRNNSARELREKEMMM-- 438

  Fly   710 PYYVRDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRG------SMHGL------ 762
               :..:.|..|..|:....             .|.|||..|....|.      |:|.|      
 Worm   439 ---MNSLNHKQPSMDSSTSR-------------RLRDIDGRSYRSDRSERSDEMSLHSLRRNGHR 487

  Fly   763 -SILAPILLCFSMMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPG--LRRESNAT 824
             ....|:.:...::..:|..||.:....|.|...||.|:||::||||||||::||  |...|...
 Worm   488 NQEKMPVSVGICIVFAFISGGAWLFSWWENWNGFDGAYYCFITLSTIGFGDIVPGQALDEGSQEK 552

  Fly   825 TWFCSVYIMSGMTLTAMCFNVIHEEIVHRIR 855
            ...|::|::.||.|.||||.::.:::|.:.|
 Worm   553 LVVCALYLLFGMALIAMCFKLMQDDVVQKAR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 27/56 (48%)
Ion_trans <601..640 CDD:278921 19/38 (50%)
Ion_trans_2 774..846 CDD:285168 31/73 (42%)
twk-39NP_001076639.1 Ion_trans_2 <120..177 CDD:285168 27/56 (48%)
Ion_trans_2 498..580 CDD:285168 31/81 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.