DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-20

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_510284.1 Gene:twk-20 / 181485 WormBaseID:WBGene00006673 Length:364 Species:Caenorhabditis elegans


Alignment Length:378 Identity:83/378 - (21%)
Similarity:133/378 - (35%) Gaps:144/378 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   598 HEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVAREVF 662
            ::|.||.||.::..|:||:|||:.||.|..|::..:.:|.||:|:.|:...|.|           
 Worm    79 YQWQFAGAFYFATVVITTVGYGHSAPSTNAGKLFCMIFALFGVPMGLIMFQSIG----------- 132

  Fly   663 SKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDVFHATPEKDAGA 727
                                     ||                                      
 Worm   133 -------------------------ER-------------------------------------- 134

  Fly   728 GAPPPNAGGPVGSVGGLGDIDSLSASESRGSMH--GLSILAPI----LLCFSMMI--IYIVFGAA 784
                            :....:.|..:.|.|:|  |.:.|..:    ||..|:.|  :.||.|..
 Worm   135 ----------------VNTFIAYSLHKFRDSLHQQGFTCLQEVTPTHLLMVSLTIGFMVIVSGTY 183

  Fly   785 VLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNAT------TWFCSVYIMSGMTLTAMCF 843
            :.:.:|||.|.|..|||.::.|||||||::|  .::.||.      .:...::|:.|:.:.:.|.
 Worm   184 MFHTIEKWSIFDAYYFCMITFSTIGFGDLVP--LQQVNALQDQPLYVFATIMFILIGLAVFSACV 246

  Fly   844 NVI--------HEEIVHRIR-----IVVE-FKKTSAANSGGGLIGGGSVSGGAGGAGGSMMDVAH 894
            |::        .:|:....|     ||:| |.:.|..:|....|...|..|...|....|..:  
 Worm   247 NLLVLGFMASNADEVTAAQREPPSAIVLERFTRNSLVDSQIFNIQKHSTVGVLPGRPRRMYSI-- 309

  Fly   895 EEGGQYYVP---ASXHYEKR------------GHLYQRNPTEETLVTDTPTSL 932
                   ||   |. |..:|            |....|.|.....:|..||::
 Worm   310 -------VPNSTADVHLRRRSTRRSIQDTVCCGCFKPRPPRHRFSLTRRPTNI 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 22/56 (39%)
Ion_trans <601..640 CDD:278921 16/38 (42%)
Ion_trans_2 774..846 CDD:285168 26/79 (33%)
twk-20NP_510284.1 Ion_trans_2 <80..135 CDD:285168 24/144 (17%)
Ion_trans_2 175..250 CDD:285168 25/76 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163800
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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