DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-34

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_506906.3 Gene:twk-34 / 180054 WormBaseID:WBGene00006686 Length:558 Species:Caenorhabditis elegans


Alignment Length:698 Identity:114/698 - (16%)
Similarity:192/698 - (27%) Gaps:330/698 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 PHPPLTSIAGSTAGSNNSNISGSNMSSNSNCGTLKSNAKLLPLQLMATPPSRKEPLTPAHPQAAS 230
            |.||:.::|.:..                     ....||.||:......:|..|.....|.:.|
 Worm    38 PEPPVNNVAPAEE---------------------SQEPKLTPLEERERKKNRVHPTMQNLPLSRS 81

  Fly   231 IQAQAQVQHQLQQQHQQQQQQQQQQHQQQQQ---QQQQRQRKRQGWCSCFSSTPGGGHAGGGVGG 292
            ..:.:..:.:..:::.::........|:.|.   |.|:|.:.||...|..||             
 Worm    82 NSSTSLSKVEAVEKYYERNAHTVSGFQRNQDTFGQLQRRYKPRQDAISVLSS------------- 133

  Fly   293 GVAAGETGKTPPGYGSKEKKKSRKATSQTVWSAL------LTNLGICMLLLAYTLLGSFIFLTIE 351
                      |...|.......|.......|.|.      |.::.:.:::|:||:.|:|:|.|:|
 Worm   134 ----------PGALGEPVMPTDRHFDRSMYWFAFHRKQIGLRHIMVALMVLSYTIFGAFMFWTVE 188

  Fly   352 --NEDSALLHQQHTLASTKRNLAGLGIGAAGIGSSIYQQQQQQQQQRTPHQQQQQHQAVQGRHAD 414
              ||.:..|.:...|    .||  |.|.|..|...:.                            
 Worm   189 SRNERAVTLERVTNL----ENL--LNILATNITEIVN---------------------------- 219

  Fly   415 NDTMAAAAAAVAAQGTLAGSASAGGLNPFGQPASSGEFVYGLDGMDATDLEAGGMPQFALSPDTY 479
                                      ||                 :.|..||             
 Worm   220 --------------------------NP-----------------NTTTTEA------------- 228

  Fly   480 DVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQDQLIKRLNEDVMLQLSHDDVANAPSSSS 544
                           .:.:..:|.:..|..|| .:::.....:|.:.                  
 Worm   229 ---------------EMQVYIREAYVSLMKLE-GQYKGSTYYKLEDH------------------ 259

  Fly   545 SSSSSSSSSSSSTGASGVPGSNNPATEAVLLHTHYHHHRAGGVGGVAVGGGPPHEWNFAKAFLYS 609
                                                              |...:|.|..||.:|
 Worm   260 --------------------------------------------------GKNWKWTFESAFFFS 274

  Fly   610 LTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVAREVFSKALCCCLCSNC 674
            :.|.||.|||::||.:.||:::...|.|..:|:|||.|...|..                     
 Worm   275 MNVYTTTGYGSIAPESILGQVLVCLYGFIFVPVTLVALRDLGQF--------------------- 318

  Fly   675 GYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDVFHATPEKDAGAGAPPPNAGGPVG 739
             :..:..|..|:..:|.|      |:....::                                 
 Worm   319 -FLVHLTKLYAQLIQRWR------EINGDTSI--------------------------------- 343

  Fly   740 SVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMMIIYIVFGAAVLYRLEKWPILDG------- 797
                  |::.:             |..||..|..::.:|:.|....::..::   |.|       
 Worm   344 ------DVNEI-------------IKIPIKACLLLLALYLAFCTIFIHVFDE---LSGDESGSGM 386

  Fly   798 -----IYFCFMSLSTIGFGDMLPGLRRESNAT-TWFCSVYIMSGMTLT 839
                 .||.|:||||||.||::|     :||| :...|:....||.||
 Worm   387 SVFLCFYFSFISLSTIGLGDIMP-----NNATFSPIISIMFFFGMALT 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 23/56 (41%)
Ion_trans <601..640 CDD:278921 16/38 (42%)
Ion_trans_2 774..846 CDD:285168 24/79 (30%)
twk-34NP_506906.3 Ion_trans_2 250..319 CDD:285168 25/158 (16%)
Ion_trans_2 366..442 CDD:285168 23/72 (32%)
Ion_trans <387..449 CDD:278921 20/48 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163808
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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