DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-24

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001367093.1 Gene:twk-24 / 179682 WormBaseID:WBGene00006677 Length:579 Species:Caenorhabditis elegans


Alignment Length:492 Identity:98/492 - (19%)
Similarity:162/492 - (32%) Gaps:162/492 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 QQQQQQQQRTPHQQQQQHQAVQGRHADNDTMAAAAA------AVAAQGTLAGSASAGGLNPFGQP 446
            ||:..:......::::....:..|.|.|.||....|      :.:..|.:..||..|        
 Worm    84 QQEDPEVLAAKEKEKKAKVMIASRDARNKTMWRHIAWLVVLFSFSLFGGVIFSAIEG-------- 140

  Fly   447 ASSGEFVYGLDGMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYKENWTKLAALE 511
                       |.:.|.|    :.:|....|.|:.|:                            
 Worm   141 -----------GYETTQL----IKKFEHEKDVYERRK---------------------------- 162

  Fly   512 IAKFQDQLIKRLNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLH 576
              .:|:||.:||.|     :.||   |......:||........|..|                 
 Worm   163 --IYQEQLFQRLRE-----IEHD---NTNPRGRNSSREHFKLEQSRHA----------------- 200

  Fly   577 THYHHHRAGGVGGVAVGGGPPHE--WNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFG 639
            ..::..:.    ||.:......|  ||......||.::.|||||||..|.|..|||:::.||..|
 Worm   201 LEWYEQKM----GVTIEEPQMRETKWNLWGGVYYSASLYTTIGYGNFHPLTKSGRIISMMYACIG 261

  Fly   640 IPLTLVYLSSTGSILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQ 704
            |||....|...|.:........:::       .|..:|   :|.:   :|.|:|:.::|.:|:  
 Worm   262 IPLVFTILLDWGFLYFTWIEYGWNR-------FNENFC---QKSL---QRDMQRRIRRERIRR-- 311

  Fly   705 AVMQEPYYVRDVFHATPEKDAGAGAP-----PPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSI 764
                          ...|....:.||     ......||..:               .|.|.||.
 Worm   312 --------------VGSELSLSSTAPLLHRTTTQLSNPVQHI---------------ESNHPLSP 347

  Fly   765 L------------APILLCFSMMIIYIVFGAAVLYRLE-KWPILDGIYFCFMSLSTIGFGDML-- 814
            |            .||........::|:..|.::...| :|......||.|.||:|||.||::  
 Worm   348 LDVDVPMGEQVQTVPIKSAAIFFFLWIMISAFIVRLWEYEWTYFTAFYFFFTSLTTIGLGDVVTK 412

  Fly   815 -PGLRRESNATTWFCSVYIMSGMTLTAMCFNVIHEEI 850
             |.....:.|.|       :.|:::..:|..::..::
 Worm   413 TPNFIIFNLAMT-------LIGLSVVGLCAAIVQAKV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 25/58 (43%)
Ion_trans <601..640 CDD:278921 17/38 (45%)
Ion_trans_2 774..846 CDD:285168 19/75 (25%)
twk-24NP_001367093.1 Ion_trans_2 <221..273 CDD:400301 23/51 (45%)
Ion_trans_2 368..442 CDD:400301 19/80 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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