DRSC/TRiP Functional Genomics Resources

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Protein Alignment FDY and AT4G17520

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_193485.1 Gene:AT4G17520 / 827467 AraportID:AT4G17520 Length:360 Species:Arabidopsis thaliana


Alignment Length:433 Identity:121/433 - (27%)
Similarity:172/433 - (39%) Gaps:117/433 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDDSSGLEQP-QIAA----VVAAPKKPEPAKAPKVPKSKSEKENKPVVAGRKA-NT 65
            |.::||   |||:   |.| ||.|    .|.||  .:.||:.|:|    .|...|..|.|:| |.
plant     5 NPFDLL---DDDA---EDPSQIVASKPLKVVAP--VQTAKSGKMP----TKPPPPSQAVREARNA 57

  Fly    66 PVAKNASPVKGGKGPA-GGDVGRPKNPTANGANNQGRFNNNQRYGNKESIGEFGNELPQRQFNNR 129
            |        .||:|.. ||..||    ...|.||:...||:   |.....|..|......:.:..
plant    58 P--------GGGRGAGRGGSYGR----GGRGGNNRDSRNND---GPANENGYGGGYRRSEEGDGA 107

  Fly   130 DNRGPPRVRSGEKFG--------------KREFDRQSGSDKTGVKSIDKREGVGAHNWGSPKQDI 180
            ...||.....|::.|              ::.:||.|   :|...:.|||:|.|..|||:.:.||
plant   108 RRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHS---RTAYGNEDKRDGAGRANWGTTQDDI 169

  Fly   181 ----EDLKTTGETSPQAEKKDSANE----QSADPAVAAEE-DESKQMTLDEWKALRDQRAKPNYN 236
                |:.....:.:...||:|...|    ::..||..||| .|.|:|||:|::.:.:::.|. ..
plant   170 TPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEKPEDKEMTLEEYEKVLEEKKKA-LQ 233

  Fly   237 LRKAGEGAADNAEWKKMIVLSKKKESNSEDEL----EYDPSLYPQRVGRLQRIVDIQFNFNDGRK 297
            ..|..|...|...::.|..||.||.:|.|..:    |.|     :|:...:.......:.|:..|
plant   234 ATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKD-----KRITEREEKTRKSLSINEFLK 293

  Fly   298 GGFRKGTRRGAGPCEGGFRNDGPRGEGGYRNDGPRG--EGGYRNEGPRGEGYRNDGPR--EQGFR 358
                        |.:         |:..||   |||  :||....||| ||.:.||.|  .:|.|
plant   294 ------------PAD---------GKSYYR---PRGGYQGGREGRGPR-EGNQRDGGRNLREGGR 333

  Fly   359 GPRFNNAPSNGYENRQDNNRFGEKRRSAEKPLKVDDEAQFPTL 401
                             |.|.|.....|..| .:.|.||||||
plant   334 -----------------NQRDGGAAAQAPTP-AIGDSAQFPTL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 33/120 (28%)
PRK11634 <308..368 CDD:236941 19/63 (30%)
AT4G17520NP_193485.1 Stm1_N 1..58 CDD:370576 24/64 (38%)
HABP4_PAI-RBP1 136..242 CDD:368109 33/109 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 52 1.000 Domainoid score I4255
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 101 1.000 Inparanoid score I2167
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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