DRSC/TRiP Functional Genomics Resources

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Protein Alignment FDY and AT4G16830

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_193416.1 Gene:AT4G16830 / 827389 AraportID:AT4G16830 Length:355 Species:Arabidopsis thaliana


Alignment Length:441 Identity:121/441 - (27%)
Similarity:173/441 - (39%) Gaps:139/441 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDDSSGLEQP-QIAAVVAAPKKPE--------PAK-APKVPKSKSEKENKPVVAGR 61
            |.::||   |||:   |.| |:|..:....|.:        ||| |||:|    .|...|..|.|
plant     5 NPFDLL---DDDA---EDPSQLAVAIEKIDKSKKSGQVSSLPAKSAPKLP----SKPLPPAQAVR 59

  Fly    62 KANTPVAKNASPVKGGKGPAGGDVGRPKNPTANGANNQGRFNNNQRYGNKESIGEFGNELPQRQF 126
            :     |::.:| :||.|..|.:.||       |..|:...||....|..:..||  .::.:..:
plant    60 E-----ARSDAP-RGGGGRGGFNRGR-------GGYNRDDGNNGYSGGYTKPSGE--GDVSKSSY 109

  Fly   127 NNRDNRGPPR---------VRSGEKFG-----------KREFDRQSGSDKTGVKSIDKREGVGAH 171
            ..|...|.||         ...|.:.|           :|.|:|:||   ||..|..||:|.|..
plant   110 ERRGGGGAPRGSFRGEGGGPGGGRRGGFSNEGGDGERPRRAFERRSG---TGRGSDFKRDGSGRG 171

  Fly   172 NWGSPKQDI----------EDLKTTGETSPQAEKKDSANEQSADPAVAAEEDESKQMTLDEWKAL 226
            |||:|.::|          |..|..||.....:....||::  |..|..:|.|.|:|||||::.:
plant   172 NWGTPGEEIAAETEAVAGVETEKDVGEKPAVDDVAADANKE--DTVVEEKEPEDKEMTLDEYEKI 234

  Fly   227 RDQRAKPNYNLRKAGEGAADNAEWKKMIVLSKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFN 291
            .:::.|...:| ...|...|...::.|..||.||   |.||:..       ::|          :
plant   235 LEEKKKALQSL-TTSERKVDTKVFESMQQLSNKK---SNDEIFI-------KLG----------S 278

  Fly   292 FNDGRKGGFRKGTRRGAG------PCEGGFRNDGPRGEGGYRNDGPRGEGGYRNEGPRGEGYRND 350
            ..|.||....:..::...      |.|||....|  |.|| |..|.||.||. :.|..| ||||:
plant   279 DKDKRKDDKEEKAKKAVSINEFLKPAEGGNYYRG--GRGG-RGRGGRGRGGV-SSGESG-GYRNE 338

  Fly   351 GPREQGFRGPRFNNAPSNGYENRQDNNRFGEKRRSAEKPLKVDDEAQFPTL 401
            .             ||:.|                        |.||||:|
plant   339 A-------------APAIG------------------------DAAQFPSL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 36/118 (31%)
PRK11634 <308..368 CDD:236941 22/65 (34%)
AT4G16830NP_193416.1 Stm1_N 1..66 CDD:370576 23/75 (31%)
HABP4_PAI-RBP1 147..252 CDD:368109 36/110 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 52 1.000 Domainoid score I4255
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 101 1.000 Inparanoid score I2167
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.060

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