DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FDY and AT4G16830

DIOPT Version :10

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_193416.1 Gene:AT4G16830 / 827389 AraportID:AT4G16830 Length:355 Species:Arabidopsis thaliana


Alignment Length:441 Identity:121/441 - (27%)
Similarity:173/441 - (39%) Gaps:139/441 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDDSSGLEQP-QIAAVVAAPKKPE--------PAK-APKVPKSKSEKENKPVVAGR 61
            |.::||   |||:   |.| |:|..:....|.:        ||| |||:|    .|...|..|.|
plant     5 NPFDLL---DDDA---EDPSQLAVAIEKIDKSKKSGQVSSLPAKSAPKLP----SKPLPPAQAVR 59

  Fly    62 KANTPVAKNASPVKGGKGPAGGDVGRPKNPTANGANNQGRFNNNQRYGNKESIGEFGNELPQRQF 126
            :     |::.:| :||.|..|.:.||       |..|:...||....|..:..||  .::.:..:
plant    60 E-----ARSDAP-RGGGGRGGFNRGR-------GGYNRDDGNNGYSGGYTKPSGE--GDVSKSSY 109

  Fly   127 NNRDNRGPPR---------VRSGEKFG-----------KREFDRQSGSDKTGVKSIDKREGVGAH 171
            ..|...|.||         ...|.:.|           :|.|:|:||   ||..|..||:|.|..
plant   110 ERRGGGGAPRGSFRGEGGGPGGGRRGGFSNEGGDGERPRRAFERRSG---TGRGSDFKRDGSGRG 171

  Fly   172 NWGSPKQDI----------EDLKTTGETSPQAEKKDSANEQSADPAVAAEEDESKQMTLDEWKAL 226
            |||:|.::|          |..|..||.....:....||::  |..|..:|.|.|:|||||::.:
plant   172 NWGTPGEEIAAETEAVAGVETEKDVGEKPAVDDVAADANKE--DTVVEEKEPEDKEMTLDEYEKI 234

  Fly   227 RDQRAKPNYNLRKAGEGAADNAEWKKMIVLSKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFN 291
            .:::.|...:| ...|...|...::.|..||.||   |.||:..       ::|          :
plant   235 LEEKKKALQSL-TTSERKVDTKVFESMQQLSNKK---SNDEIFI-------KLG----------S 278

  Fly   292 FNDGRKGGFRKGTRRGAG------PCEGGFRNDGPRGEGGYRNDGPRGEGGYRNEGPRGEGYRND 350
            ..|.||....:..::...      |.|||....|  |.|| |..|.||.||. :.|..| ||||:
plant   279 DKDKRKDDKEEKAKKAVSINEFLKPAEGGNYYRG--GRGG-RGRGGRGRGGV-SSGESG-GYRNE 338

  Fly   351 GPREQGFRGPRFNNAPSNGYENRQDNNRFGEKRRSAEKPLKVDDEAQFPTL 401
            .             ||:.|                        |.||||:|
plant   339 A-------------APAIG------------------------DAAQFPSL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:461421 36/118 (31%)
PRK11634 <308..368 CDD:236941 22/65 (34%)
AT4G16830NP_193416.1 Stm1_N 1..66 CDD:430706 23/75 (31%)
HABP4_PAI-RBP1 147..252 CDD:461421 36/110 (33%)

Return to query results.
Submit another query.