DRSC/TRiP Functional Genomics Resources

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Protein Alignment FDY and serbp1b

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_005171185.1 Gene:serbp1b / 797732 ZFINID:ZDB-GENE-031118-196 Length:410 Species:Danio rerio


Alignment Length:409 Identity:127/409 - (31%)
Similarity:179/409 - (43%) Gaps:83/409 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDDSSGLEQPQIAA-----VVAAPKKPEPAKAPKVPKSKSEKENKPVVAGRKAN-- 64
            ||::.|.  ||:|...|..:.|.     ..|:......|:|.|.||.:|:|:.|.....:|.:  
Zfish    15 NRFDQLL--DDESDPFEILKAAENKKKDAAASGGSKTAAQAAKQPKKESQKDRKNTAQDKKEDIQ 77

  Fly    65 --TPVAKNASPVKGGK-----GPA------GGDVGRP------KNP--------TANGANNQGRF 102
              .|:.|......|.|     |||      |...|||      :.|        .|:.....|.|
Zfish    78 PPVPLKKEGMRRVGRKPEQQQGPASSQHPGGPGEGRPGDRRPDRRPPRERRFDKPADEKPEGGDF 142

  Fly   103 NNNQRYGNKESIGEFGNELPQRQFNNRDNRGPPRVRSGEKF---GKREFDRQSGSDKTGVKSIDK 164
            :.::..|:|.|.|..|.     :...|..||....| |:.|   |||:|||.||:||...|..:|
Zfish   143 SADKPIGDKPSRGRGGG-----RGMGRGGRGRGMGR-GDGFDSRGKRDFDRHSGNDKARQKGEEK 201

  Fly   165 REGVGAHNWGSPKQDIEDLKTTG--ETSPQAEKKDSANEQSADPAVAAEEDES-KQMTLDEWKAL 226
            |.|.|:||||..|::..:|..:.  |..|:.|:...|:.::.:..|...:||. |:||||||||:
Zfish   202 RSGSGSHNWGGVKEETSELDQSAAPEPVPEGEEHAPADSENKENEVEEVKDEGPKEMTLDEWKAM 266

  Fly   227 RD-QRAKPNYNLRKAGEGAADNAEWKKMIVLSKKK--------ESNSEDELE---YDPSLYPQ-- 277
            :| :|||..:|:||..||  ::.:|||..||.|.|        |.::...:|   .||..:.:  
Zfish   267 QDKERAKVEFNIRKPNEG--NDGQWKKGYVLHKSKSEEVGTVGERHAGSVIEAGDVDPDSFHKAE 329

  Fly   278 -------RVGRLQRIVDIQFNFND-GRKGGFRKGTRRGAGPCEGGFRNDGPRGEGGYRNDGPRGE 334
                   |.........::.||.| ||.|       ||.|...||   .|.||.||....|....
Zfish   330 EGGDHHFRKPANDITSQLEINFGDLGRPG-------RGRGGSRGG---RGGRGGGGGSGGGRPSR 384

  Fly   335 GGYRNEGPRGEGYRN-DGP 352
            ||.|:|...|....| |.|
Zfish   385 GGGRSEKGGGVSVPNVDDP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 44/101 (44%)
PRK11634 <308..368 CDD:236941 17/46 (37%)
serbp1bXP_005171185.1 IHABP4_N 5..97 CDD:292792 22/83 (27%)
HABP4_PAI-RBP1 181..283 CDD:282609 44/101 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7158
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 156 1.000 Inparanoid score I4255
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm6592
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
88.160

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