DRSC/TRiP Functional Genomics Resources

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Protein Alignment FDY and Serbp1

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_080090.2 Gene:Serbp1 / 66870 MGIID:1914120 Length:407 Species:Mus musculus


Alignment Length:468 Identity:128/468 - (27%)
Similarity:182/468 - (38%) Gaps:149/468 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDD----------------SSGLEQPQIAAVVAAPKKPEPAKAPKVPKSKSEKENK 55
            ||::.||.|:.|                ..|:..|...:...|..:.....|.|..:.:|:|:.|
Mouse    15 NRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRK 79

  Fly    56 -PV-----VAGRKANT--PVAKNASPVKGGKGPAGGDVGRPKNPTANGANN------QGRFNNNQ 106
             |:     ||.:|..|  |||.....::        .|||..:....|...      :.|....:
Mouse    80 NPLPPSVGVADKKEETQPPVALKKEGIR--------RVGRRPDQQLQGDGKLIDRRAERRPPRER 136

  Fly   107 RY----GNKESIGEFGNELP--QRQFNNRDNRGPPR------VRSGEKF---GKREFDRQSGSDK 156
            |:    ..|...|||..:.|  :|....|...|..|      :..|:.|   |||||||.||||:
Mouse   137 RFEKPLEEKGEGGEFSVDRPIIERPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDR 201

  Fly   157 ------TGVKSIDKREGVGAHNWG--------SPK----------QDIEDLKTTGETSPQAEKKD 197
                  :|:|..|||.|.|:||||        |||          .|::....|.|| |:.|:..
Mouse   202 SSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNCSDLDQSNVTEET-PEGEEHP 265

  Fly   198 SANEQSADPAV-AAEEDESKQMTLDEWKALRDQ-RAKPNYNLRKAGEGAADNAEWKKMIVL--SK 258
            .|:.::.:..| ..:|:..|:||||||||:::: |||..:|:||..|||  :.:|||..||  ||
Mouse   266 VADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGA--DGQWKKGFVLHKSK 328

  Fly   259 KKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRKGGFRKGTRRGAGPCEGGFRNDGPRGE 323
            .:|:::||.                 ::|..          |||.........|..|.:.|..|.
Mouse   329 SEEAHAEDS-----------------VMDHH----------FRKPANDITSQLEINFGDLGRPGR 366

  Fly   324 GGYRNDGPRGEGGYRNEGPRGEGYRNDGPREQGFRGPRFNNAPSNGYENRQDNNRFGEKRRSAEK 388
            ||....|.||.||..|.|.|.:                                     :.||..
Mouse   367 GGRGGRGGRGRGGRPNRGSRTD-------------------------------------KSSASA 394

  Fly   389 PLKVDDEAQFPTL 401
            | .|||...||.|
Mouse   395 P-DVDDPEAFPAL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 49/123 (40%)
PRK11634 <308..368 CDD:236941 14/59 (24%)
Serbp1NP_080090.2 IHABP4_N 5..119 CDD:292792 25/111 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..227 55/201 (27%)
HABP4_PAI-RBP1 189..312 CDD:282609 49/123 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288 10/46 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..407 32/145 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8639
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4516
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm8776
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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