DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FDY and Habp4

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001073409.1 Gene:Habp4 / 361196 RGDID:1306486 Length:411 Species:Rattus norvegicus


Alignment Length:347 Identity:91/347 - (26%)
Similarity:138/347 - (39%) Gaps:99/347 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SGLEQPQIAAVVAAPKKPEPAKAPKVPK---------------------SKSEKENKPVVAGRKA 63
            |..:||.      :|..|:|....:.|:                     .:|.:|.:|....|:|
  Rat   101 SSAQQPD------SPGGPQPPGQKRTPRRGEQQGWNDNRGTDVVLDRAERRSYREYRPYDTERQA 159

  Fly    64 NTPVAK-----------NASPVKGGKGPAGGDVGRPKNPTANGANNQGRFNNNQRYGNKESIGEF 117
            .:...|           ...|::|..||.|            |..|:||             |..
  Rat   160 ESTAEKFTDEKPVDRFDRDRPLRGRGGPRG------------GLRNRGR-------------GGP 199

  Fly   118 GNELPQRQFNNRDNRGPPRVRSGEKFGKREFDRQSGSDKTGVKSIDKREGVGAHNWGSPK--QDI 180
            ||    |.|::.|.|           |||:|:|...|||.. :..|...|.|...|||.|  .|.
  Rat   200 GN----RAFDSFDQR-----------GKRDFERYGSSDKAN-RMEDSMGGCGVRTWGSGKDTSDT 248

  Fly   181 EDLKTTGETSPQAEKKDSANEQSAD--PAVAAEED-ESKQMTLDEWKALRDQ-RAKPNYNLRKAG 241
            |......|||...|.:...:|:||.  |.:..||: :.::|||||||.|::| |.||.:|:||  
  Rat   249 EPPAPMEETSMMEECQGVLDEESASKVPELEVEEENQVQEMTLDEWKNLQEQTRPKPEFNIRK-- 311

  Fly   242 EGAADNAEWKKMIVLSKKKESNS--EDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRKGGFRKGT 304
               .::....|.:|:.|.:..:.  :|:.|.:..::.:....:...::|.|. |..|.|...:|:
  Rat   312 ---PESTVPSKAVVIHKSRYRDDIVKDDYEDESHVFRKAANDITSQLEINFG-NLPRPGRGARGS 372

  Fly   305 RRGAGPCEGGFR---NDGPRGE 323
            .||.   .|..|   |.|||.|
  Rat   373 TRGG---RGRIRRTENYGPRAE 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 42/103 (41%)
PRK11634 <308..368 CDD:236941 7/19 (37%)
Habp4NP_001073409.1 IHABP4_N 16..162 CDD:406560 12/66 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..317 71/267 (27%)
HABP4_PAI-RBP1 211..314 CDD:398441 42/108 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..411 14/38 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 137 1.000 Inparanoid score I4446
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm9023
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.070

Return to query results.
Submit another query.