DRSC/TRiP Functional Genomics Resources

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Protein Alignment FDY and SPBC16A3.08c

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_596781.1 Gene:SPBC16A3.08c / 2539743 PomBaseID:SPBC16A3.08c Length:284 Species:Schizosaccharomyces pombe


Alignment Length:346 Identity:84/346 - (24%)
Similarity:117/346 - (33%) Gaps:113/346 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDNSGNNRYELLFMDDDDSSGLEQPQIAAV---VAAPKKPEPAKAPKVPK---SKSEKENKPVVA 59
            |..:..|.::||        |.|.|.....   .||.:..:.:.:|.||:   ::|....|    
pombe     1 MSVASKNLFDLL--------GEETPAATTTEKKTAASRDKKRSDSPPVPRELVAQSTTSRK---- 53

  Fly    60 GRKANTPVAKNASPVKGGKGPAGGDVGRPKNPTANGANNQGRFNNNQRYGNKESIGEFGNELPQR 124
             |..|.|.                    |:..|.|...:|.|.......||:    .|..|..:.
pombe    54 -RDPNQPT--------------------PRERTVNKKADQPRRRRQAPQGNE----AFAREGKEA 93

  Fly   125 QFNNR----------DNRGPPRVRSGEKFGKREFDRQSGSDKTGVKSIDKREGVGAHNWGSPKQD 179
            :.||.          .||...|.|.|     |||||.|.:.:...|...:|      .||     
pombe    94 RANNAAHPVDATGAPSNRRNARARRG-----REFDRHSQTGRVDTKKATER------GWG----- 142

  Fly   180 IEDLKTTGETSPQAEKKDSANEQSADPAVAAEEDESKQMTLDEWKALRDQRAKP-------NYNL 237
              ||..:......||  :..|..|.....||||:..|  ||||:.:.|...|||       ..|.
pombe   143 --DLVNSAANPDVAE--NEGNTPSGAQTPAAEEENVK--TLDEYLSERKSAAKPVGRTVEKLENA 201

  Fly   238 RKAGEGAADN--AEWKKMIVLSKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRKGGF 300
            .|..:.|.:.  |..||.  .|:||.:..|.:        |::|     ::||:..|.       
pombe   202 TKVEKSAPEELFASLKKS--ASQKKSAAKESK--------PKKV-----LLDIEQTFT------- 244

  Fly   301 RKGTRRGAGPCEGGFRNDGPR 321
                   |.|..||..|..||
pombe   245 -------ARPARGGRPNRAPR 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 31/104 (30%)
PRK11634 <308..368 CDD:236941 7/14 (50%)
SPBC16A3.08cNP_596781.1 Stm1_N 3..76 CDD:312935 21/105 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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