DRSC/TRiP Functional Genomics Resources

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Protein Alignment FDY and vig-1

DIOPT Version :9

Sequence 1:NP_001303579.2 Gene:FDY / 8674077 FlyBaseID:FBgn0265047 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001367502.1 Gene:vig-1 / 173512 WormBaseID:WBGene00006924 Length:378 Species:Caenorhabditis elegans


Alignment Length:427 Identity:131/427 - (30%)
Similarity:181/427 - (42%) Gaps:128/427 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRYELLFMDDDD-SSGLEQPQIAAVVAAPKKPEPAKAPKVPKSKSEKENKPVVAGRKANTPVAKN 70
            |::.|...|||: ....|..|..:.:||.||.|          ||.|..:||   :.|..|||..
 Worm    11 NKFGLPSDDDDEYDDPRELIQKVSQIAAKKKEE----------KSVKPAQPV---KPAAAPVAAT 62

  Fly    71 -----ASPVKGGKGPAGGDVGRPKN----PTANGANNQGRFNNNQRYGNKESIGEFG-------- 118
                 |...:||:|...|..|||::    ...||...||   .|:|.|.:.. ||.|        
 Worm    63 KTDGAAGRGRGGRGRGRGGAGRPRDGERVSNENGDRPQG---ENRRGGPRRG-GERGAARPAGRG 123

  Fly   119 -----------NELPQRQFNNRDNR---------------GPPRVRSGEKFGK-REFDRQSGSDK 156
                       .|.|:::.:..|.:               ||...|.|.:.|: |:||||||||:
 Worm   124 GRGGFTRENREGEEPKQEVSFEDGQDTRAPRRRGGFTLGGGPSGGRGGGRGGRGRQFDRQSGSDR 188

  Fly   157 TGVKSIDKREGVGAHNWGSPKQDI----EDLKTTG--ETSPQAEKKDSANE--QSADPAVAAEED 213
            |||:|.||::|.|..|||..|.::    |::...|  .|.|:..::.:|.|  ..|:.||.|   
 Worm   189 TGVRSFDKKDGHGKGNWGDQKDELAGETENIAPEGAESTEPEVPREKTAEELAYEAELAVLA--- 250

  Fly   214 ESKQMTLDEWKALRDQRAKPNYNLRKAGEGAADNAEWKKMIVLSKKKESNSEDELEYDPSLYPQR 278
              ||.||.|:||.....| |.:|.|||||||||.  :.|::.:.|:...:.|:    |..:...:
 Worm   251 --KQKTLKEFKAAAKADA-PKFNTRKAGEGAADT--FGKLVPIKKEVIPDREE----DEVVVIHK 306

  Fly   279 VGRLQRIVDIQFNFNDGRKGGFRKGTRRGAGPCEGGFRNDGPRGEGGYRND--------GPRGEG 335
            ..|.| ::||...                       ||||.|..|   |||        ||||  
 Worm   307 APRKQ-VLDISIT-----------------------FRNDRPERE---RNDRSERPQRGGPRG-- 342

  Fly   336 GYRNEGPRGEGYRNDGPREQGFRGPRFNNAPSNGYEN 372
                 |.||.|   .|.:.||..|.| ||.|.|..::
 Worm   343 -----GGRGGG---RGGQRQGGHGGR-NNTPFNASDD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FDYNP_001303579.2 HABP4_PAI-RBP1 144..242 CDD:335891 45/106 (42%)
PRK11634 <308..368 CDD:236941 25/67 (37%)
vig-1NP_001367502.1 HABP4_PAI-RBP1 179..276 CDD:398441 43/102 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I5812
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I3143
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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