DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42526 and CG6276

DIOPT Version :9

Sequence 1:NP_001163401.1 Gene:CG42526 / 8674075 FlyBaseID:FBgn0260431 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster


Alignment Length:218 Identity:44/218 - (20%)
Similarity:69/218 - (31%) Gaps:80/218 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LIASVKRNVSIFEKYHTRYDRK----QAWIAVAQACQKSVEYCQIRWKSLR-------DRYVRET 61
            ||..|:|:.:|:...|..|..:    ..|..|....:|:......:|.:||       ..|:.|.
  Fly    33 LIEIVQRDEAIYNPRHKYYFCRPYVENFWREVDLKLEKNPGASLAKWTNLRISFRREYTNYLEEK 97

  Fly    62 QKPAATRSNIRKFKELDFLREHIRIR-RKPNELCNTLNTNKTLVPGVTVDSQSADELALERNGIT 125
            ..|..:     .|..:.||..::|.: ::|..|                |:|..|.||       
  Fly    98 VPPCWS-----YFDRMFFLHPYLRKKHQQPKSL----------------DTQVQDALA------- 134

  Fly   126 EFQPDEFIIEYKGEEEYLSETDNSSAEFISEDSACNIGSELPYVTKPSFNGEGQSQTQAKFMSVM 190
                            :||   |.|:....|.|          ||.|..:..|...|        
  Fly   135 ----------------HLS---NLSSRMQRERS----------VTIPGSSSIGGQPT-------- 162

  Fly   191 NLIESALKDKPAEPQDPFYKYLE 213
               .||.:..||:..|.:..|.:
  Fly   163 ---PSAHQSPPAQQLDNYLDYFD 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42526NP_001163401.1 MADF 8..85 CDD:214738 19/87 (22%)
CG6276NP_650445.3 MADF 32..116 CDD:214738 19/87 (22%)
BESS 431..465 CDD:281011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12243
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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