DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42554 and Nrbf2

DIOPT Version :10

Sequence 1:NP_001163314.1 Gene:CG42554 / 8674073 FlyBaseID:FBgn0260756 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001388976.1 Gene:Nrbf2 / 641340 MGIID:1354950 Length:316 Species:Mus musculus


Alignment Length:273 Identity:55/273 - (20%)
Similarity:101/273 - (36%) Gaps:89/273 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQKRVALPKSKEVLDTLTLDFQRKLRQIEMR 72
            |||...||::|.:...:|||||.....:..|:.:|.|   |.:|::.  .|:|:.||.....::.
Mouse    39 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMK---LTESEQA--HLSLELQRDSHMKQLL 98

  Fly    73 KTQHGLNKLKDYAPLK-------ETSPML--PLRPEAGASGGAGGSAQSVAKAIDKTVQD----F 124
            ..|....:.|....||       :.:|.|  |.||...|.|.:...:|....:.::.:.:    |
Mouse    99 LIQERWKRAKREERLKAQQSTERDGAPHLQAPPRPSEDAEGQSPLLSQPYIPSTERRLPEVQGVF 163

  Fly   125 D-------------------------AKFTSSLVAKASSTLAHSEPHM-------ETLKKSD--- 154
            |                         .|...:::.:.::.:|..:.|:       |.|:|.:   
Mouse   164 DRDPDTLLFLLQQKNEPSEPCIGSKAPKDDKTIIEEQATKIADLKRHVEFLVAENERLRKENKQL 228

  Fly   155 ----------SAQEEQEHD-----------------------TCDQRLAGSG---DLDLPSLAPL 183
                      :|::|.:.|                       |..:..|.:|   |:.:|:|.||
Mouse   229 KAEKARLLKGTAEKELDVDADFVEKSELWGLPSHSESAAASSTWQKFAANTGKAKDIPIPNLPPL 293

  Fly   184 ELPSFDYSLFTSS 196
            :.||.:..|...|
Mouse   294 DFPSPELPLMELS 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42554NP_001163314.1 NRBF2_MIT 4..>64 CDD:465368 18/55 (33%)
Nrbf2NP_001388976.1 NRBF2_MIT 39..115 CDD:465368 23/80 (29%)
NRBF2 118..313 CDD:430345 31/189 (16%)

Return to query results.
Submit another query.