DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42554 and nrbf2

DIOPT Version :10

Sequence 1:NP_001163314.1 Gene:CG42554 / 8674073 FlyBaseID:FBgn0260756 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001016183.1 Gene:nrbf2 / 548937 XenbaseID:XB-GENE-1008875 Length:296 Species:Xenopus tropicalis


Alignment Length:294 Identity:63/294 - (21%)
Similarity:96/294 - (32%) Gaps:127/294 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 APLNLAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQKRVALPKSKEVLDTLTLDFQR---- 64
            :||||||...|:::||:...:|||||...:.:..|:.:|:|   |.:|::.  .|:|:.||    
 Frog     6 SPLNLAHQQSRKADRFLATGKYEEAIACHKKAAAYLSEAKK---LTQSEQA--QLSLELQRESHI 65

  Fly    65 -----------KLRQIEMRKTQHGLNKLKDYAPLKETSPMLPLRPEAGASGG-----AGGSAQSV 113
                       :.|:.|..:||.     |.....:|.|..|.....:.|...     .|.:.|..
 Frog    66 KHQLLIQERLKRARREEKLRTQQ-----KAIVAERELSAHLQASYRSAADNADSQNTLGSAGQKS 125

  Fly   114 AKAIDKTVQDFDAKFTSSLVAKASSTLAH-----SEPHMETLK-----KSDSAQEEQEHDTCDQ- 167
            .....|.|||.     .|::.:...:|.:     .|| |||.|     |.|..:.|::..|..: 
 Frog   126 GSNPGKYVQDI-----PSVLDREPDSLMYLLQRRKEP-METCKVSKAPKDDKTKLEEQATTIKEL 184

  Fly   168 --------------------------RL------------------------------------- 169
                                      ||                                     
 Frog   185 NQLVDTLLAENEALRKENKKLRAEVARLQKNPEKDLDIDTDFVEKSELWNLQQPTGSAANPTSAW 249

  Fly   170 ------AGSG-----------DLDLPSLAPLELP 186
                  :|.|           |:.||.|.|||||
 Frog   250 QKFVAHSGKGTDIPIPNLPPLDIPLPELPPLELP 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42554NP_001163314.1 NRBF2_MIT 4..>64 CDD:465368 21/59 (36%)
nrbf2NP_001016183.1 NRBF2_MIT 4..85 CDD:465368 25/83 (30%)
NRBF2 92..264 CDD:430345 26/177 (15%)

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