DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42554 and Nrbf2l1

DIOPT Version :10

Sequence 1:NP_001163314.1 Gene:CG42554 / 8674073 FlyBaseID:FBgn0260756 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_063138804.1 Gene:Nrbf2l1 / 499670 RGDID:1560263 Length:287 Species:Rattus norvegicus


Alignment Length:276 Identity:57/276 - (20%)
Similarity:103/276 - (37%) Gaps:89/276 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PLNLAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQKRVALPKSKEVLDTLTLDFQRKLRQI 69
            ||||||...||::|.:...:|||||...:.:..|:.:|.|   |.:|::.  .|:|:.||.....
  Rat     7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKATAYLSEAMK---LTQSEQA--HLSLELQRDSHMK 66

  Fly    70 EMRKTQHGLNKLKDYAPLK-------ETSPMLPL--RPEAGASGGAGGSAQSVAKAIDKTVQD-- 123
            ::...|....:.|....||       :..|.|..  ||...:.|.:...:|:...:.:|.:.:  
  Rat    67 QLLLIQERWKRAKREERLKAQQRTDRDGVPHLQASHRPSEDSEGQSPLLSQTYIPSTEKHLPEVQ 131

  Fly   124 --FD-------------------------AKFTSSLVAKASSTLAHSEPHM-------ETLKKSD 154
              ||                         .|...:::.:.::.:|..:.|:       |.|:|.:
  Rat   132 GVFDRDPDTLLFLLQQKNEPSEPCIGSKAPKDDKTIIEEQATKIAELKRHVEFLVAENERLRKEN 196

  Fly   155 S-------------AQEEQEHD-----------------------TCDQRLAGSG---DLDLPSL 180
            .             |::|.:.|                       |..:..|.:|   |:.:|:|
  Rat   197 KQLKAEKARLLKGPAEKELDVDADFVEKSELWGLPPHSDTATASSTWQKFAANTGKAKDIPIPNL 261

  Fly   181 APLELPSFDYSLFTSS 196
            .||:.||.:..|...|
  Rat   262 PPLDFPSPELPLMELS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42554NP_001163314.1 NRBF2_MIT 4..>64 CDD:465368 21/58 (36%)
Nrbf2l1XP_063138804.1 None

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