DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42516 and sfc7

DIOPT Version :10

Sequence 1:NP_001163086.1 Gene:CG42516 / 8674068 FlyBaseID:FBgn0260390 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001343039.1 Gene:sfc7 / 5802974 PomBaseID:SPAC1250.07 Length:120 Species:Schizosaccharomyces pombe


Alignment Length:136 Identity:31/136 - (22%)
Similarity:61/136 - (44%) Gaps:25/136 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSDSEYEDTEYLVFADFKNHIHPHQLKHEDAAIKIIGIESDTPMAEVNGSIYRGRYEHSVGTNVF 68
            |.:::.:|.|.:|| .|:|.....|...:   ..|:||:...|:..:.|..:||.:...:||::.
pombe     7 SLETDVDDVENIVF-QFQNSSLDFQSSDD---FSILGIDQPHPIVRIGGMFFRGTWHQPIGTDIV 67

  Fly    69 FEKEKDN-LASDPLFESVCRQRYQYVDKSTKVISFERVYVDNLHQEVEK--SAETEEDDQTEPKP 130
            .....|: |:.|.|.  :|::|          :..|::.:      |.|  |..:.....|:.:|
pombe    68 VPSVNDSELSRDGLV--LCKRR----------LMLEQIRL------VPKNPSPSSSIHSPTQGEP 114

  Fly   131 ESLKLN 136
            |::..|
pombe   115 ENISEN 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42516NP_001163086.1 TFIIIC_sub6 10..107 CDD:463085 23/97 (24%)
sfc7NP_001343039.1 TFIIIC_sub6 14..96 CDD:463085 23/103 (22%)

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