DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42516 and sfc7

DIOPT Version :9

Sequence 1:NP_001163086.1 Gene:CG42516 / 8674068 FlyBaseID:FBgn0260390 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001343039.1 Gene:sfc7 / 5802974 PomBaseID:SPAC1250.07 Length:120 Species:Schizosaccharomyces pombe


Alignment Length:136 Identity:31/136 - (22%)
Similarity:61/136 - (44%) Gaps:25/136 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSDSEYEDTEYLVFADFKNHIHPHQLKHEDAAIKIIGIESDTPMAEVNGSIYRGRYEHSVGTNVF 68
            |.:::.:|.|.:|| .|:|.....|...:   ..|:||:...|:..:.|..:||.:...:||::.
pombe     7 SLETDVDDVENIVF-QFQNSSLDFQSSDD---FSILGIDQPHPIVRIGGMFFRGTWHQPIGTDIV 67

  Fly    69 FEKEKDN-LASDPLFESVCRQRYQYVDKSTKVISFERVYVDNLHQEVEK--SAETEEDDQTEPKP 130
            .....|: |:.|.|.  :|::|          :..|::.:      |.|  |..:.....|:.:|
pombe    68 VPSVNDSELSRDGLV--LCKRR----------LMLEQIRL------VPKNPSPSSSIHSPTQGEP 114

  Fly   131 ESLKLN 136
            |::..|
pombe   115 ENISEN 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42516NP_001163086.1 TFIIIC_sub6 36..69 CDD:287402 9/32 (28%)
sfc7NP_001343039.1 TFIIIC_sub6 35..67 CDD:313617 9/31 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21860
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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