DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OtopLa and otop2

DIOPT Version :10

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:XP_001338079.4 Gene:otop2 / 494472 ZFINID:ZDB-GENE-050104-2 Length:572 Species:Danio rerio


Alignment Length:374 Identity:95/374 - (25%)
Similarity:150/374 - (40%) Gaps:86/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   668 ESL-DNIYPAALSSNIGTLNSTACGR------------IDIMGTIVYDSAPYLYPFIIEYSLIGA 719
            ||| ..:.|....:|..:.|.|..||            .|:.....|    |||||.|||||..:
Zfish   221 ESLHQTVAPVKPPTNNNSYNDTLDGRAAASECECLHNMCDLFEKAYY----YLYPFNIEYSLFAS 281

  Fly   720 VVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGA 784
            .:.|||||::||   :|:|.. .|:|...|....|                  |...||::||..
Zfish   282 AMTYVMWKNVGR---KMDDHH-SHKLHFSLWDVLV------------------GPLAGLIVLVAG 324

  Fly   785 LICLILFFVLV-----RHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLN 844
            |...:::.|.|     :.::.:|:..|:.:....:||:.:.||..:.|...|..:...:..:...
Zfish   325 LATFVVYEVDVSKDDPKKKEEALIMHYIMNIVAVLLMSSSALAGCILFRMDKREQVSGKNPTRSL 389

  Fly   845 DILLRISA-FGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFI----------- 897
            |:.|.:.| .|.|....|:|:|.....::...:.|......:.|.::.:|..|:           
Zfish   390 DVGLLVGASLGQFLICYFTIVAVLASGVQGHTNGLNLACAMLTVIELCIQNAFLIKGLHREPFKE 454

  Fly   898 ---------------ADVSRRRVHL-PEHDRSKP-----GR---------QIVTFLLICNVAMFA 932
                           .|..||...: |.|....|     ||         :|..|||:|||.::.
Zfish   455 TEVATVFANVMAVKERDPERRSSSIVPAHTLPIPLTLLQGRMSWKRRVLKEICAFLLLCNVTLWI 519

  Fly   933 IYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEI 981
            |..|.|:..|.|.|..:.|.|..|:.:..|.:|..||:|.||..:|.|:
Zfish   520 IPAFGARPQFDNTVGPDVYEFQTWAAVVNIGMPFGIFYRMHSVASLFEV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>425 CDD:460840
Otopetrin <673..972 CDD:460840 87/357 (24%)
otop2XP_001338079.4 Otopetrin 133..558 CDD:460840 90/362 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.