DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and otop2

DIOPT Version :9

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:XP_001338079.4 Gene:otop2 / 494472 ZFINID:ZDB-GENE-050104-2 Length:572 Species:Danio rerio


Alignment Length:374 Identity:95/374 - (25%)
Similarity:150/374 - (40%) Gaps:86/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   668 ESL-DNIYPAALSSNIGTLNSTACGR------------IDIMGTIVYDSAPYLYPFIIEYSLIGA 719
            ||| ..:.|....:|..:.|.|..||            .|:.....|    |||||.|||||..:
Zfish   221 ESLHQTVAPVKPPTNNNSYNDTLDGRAAASECECLHNMCDLFEKAYY----YLYPFNIEYSLFAS 281

  Fly   720 VVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGA 784
            .:.|||||::||   :|:|.. .|:|...|....|                  |...||::||..
Zfish   282 AMTYVMWKNVGR---KMDDHH-SHKLHFSLWDVLV------------------GPLAGLIVLVAG 324

  Fly   785 LICLILFFVLV-----RHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLN 844
            |...:::.|.|     :.::.:|:..|:.:....:||:.:.||..:.|...|..:...:..:...
Zfish   325 LATFVVYEVDVSKDDPKKKEEALIMHYIMNIVAVLLMSSSALAGCILFRMDKREQVSGKNPTRSL 389

  Fly   845 DILLRISA-FGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFI----------- 897
            |:.|.:.| .|.|....|:|:|.....::...:.|......:.|.::.:|..|:           
Zfish   390 DVGLLVGASLGQFLICYFTIVAVLASGVQGHTNGLNLACAMLTVIELCIQNAFLIKGLHREPFKE 454

  Fly   898 ---------------ADVSRRRVHL-PEHDRSKP-----GR---------QIVTFLLICNVAMFA 932
                           .|..||...: |.|....|     ||         :|..|||:|||.::.
Zfish   455 TEVATVFANVMAVKERDPERRSSSIVPAHTLPIPLTLLQGRMSWKRRVLKEICAFLLLCNVTLWI 519

  Fly   933 IYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEI 981
            |..|.|:..|.|.|..:.|.|..|:.:..|.:|..||:|.||..:|.|:
Zfish   520 IPAFGARPQFDNTVGPDVYEFQTWAAVVNIGMPFGIFYRMHSVASLFEV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>405 CDD:281218
Otopetrin <679..972 CDD:281218 86/351 (25%)
otop2XP_001338079.4 Otopetrin 133..558 CDD:281218 90/362 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4607
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6364
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.190

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