DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and otop1

DIOPT Version :9

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_942098.1 Gene:otop1 / 322893 ZFINID:ZDB-GENE-030131-1613 Length:586 Species:Danio rerio


Alignment Length:405 Identity:91/405 - (22%)
Similarity:152/405 - (37%) Gaps:133/405 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 VSFENLESLDNIYPAALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMW 726
            :.:.||.::|.......::::..:.||              |..|||||.|||.:..:.:|:|||
Zfish   230 MGYANLSTVDVQPHCNCTTSVWLMFST--------------SLYYLYPFNIEYHIFVSAMLFVMW 280

  Fly   727 KHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILF 791
            |:|||...|.::.          .||:.               .|.||..|.|   |.|:.|.  
Zfish   281 KNIGRTLDRHSNR----------KRRST---------------GSTGLLLGPL---GGLVALA-- 315

  Fly   792 FVLVRHQQFSLLAIYL-----------ADASHCILMAFAILAIIVGFIRVKNLKFRCEEQ----- 840
                  ...|:|.:||           |..|.......|::|.:........|.:|.|.:     
Zfish   316 ------SSVSVLVVYLIHLEKTEEMHEAAVSMFYYYGVAMMACMCVGSGTGLLVYRMENRPMDTG 374

  Fly   841 SN----LNDILLRISAFGLFTYSVFSIIAGSLKVLESEPSLLVT--TTGGVAVFQVILQLLFIAD 899
            ||    |:..||..|:.|.:..|..|::|...:..:..||...|  |...:.|.:..:|.|||.:
Zfish   375 SNPARTLDTELLLASSLGSWLMSWCSVVASVAEAGQKSPSFSWTSLTYSLLLVLEKCIQNLFIVE 439

  Fly   900 VSRRR---------------VHLP-----------EHDRSK------------------------ 914
            ...||               |.:|           .||:.:                        
Zfish   440 SLYRRHSEEEEDAAAPQVFSVAVPPYDGILNHGYEAHDKHREAEPAAGSHALSRKQPDAPLPAGQ 504

  Fly   915 -----PGRQ------IVTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCI 968
                 |||:      |..||.:||::::.:..|..:..:.||::.|.:|...|:.:..:.:||.:
Zfish   505 RLDVTPGRKRQILKNICMFLFMCNISLWILPAFGCRPQYDNPLENETFGTSVWTTVLNVAIPLNL 569

  Fly   969 FHRFHSAVTLAEIWK 983
            |:|.||..:|.|:::
Zfish   570 FYRMHSVASLFEVFR 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>405 CDD:281218
Otopetrin <679..972 CDD:281218 83/375 (22%)
otop1NP_942098.1 Otopetrin 127..572 CDD:281218 86/391 (22%)
FYR-box 163..167
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..505 0/20 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4607
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6364
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.100

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