DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and Otop1

DIOPT Version :9

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_852098.1 Gene:Otop1 / 305427 RGDID:631389 Length:600 Species:Rattus norvegicus


Alignment Length:921 Identity:153/921 - (16%)
Similarity:253/921 - (27%) Gaps:470/921 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQHTLAKFLEAPV--- 251
            |....|.....|.|.|..:       |.|..|...:|:....|.|:..:.|:.|..|:...:   
  Rat    19 SAAPSGIAACPPPPSPLAR-------ASPQASGPRRGASVPQKLAETLSSQYGLNVFVAGLLFLL 76

  Fly   252 ------------DAEVAVT-------------------PKNVRKRKTTHSDLTHGSFFLRVGAIA 285
                        |....:|                   .:.:.:.|.||:    |:.:|| |:|.
  Rat    77 AWAVHATGVGKSDLLCVLTALMLLQLLWMLWYVGRSYMQRRLIRPKDTHA----GARWLR-GSIT 136

  Fly   286 FGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARF 350
            ......|.:|....::| |.| |.|.....||.|:...:.|.:|:||::.:|:..|..||.:.||
  Rat   137 LFAFITIVLGCLKVAYF-IGF-SECLSATEGVFPVTHAVHTLLQVYFLWGHAKDIIMSFKTLERF 199

  Fly   351 GLMHVVATNICVWIRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNS 415
            |::|.|.||:.:|..:::.||      .||.||.:                              
  Rat   200 GVIHSVFTNLLLWANSVLNES------KHQLNEHK------------------------------ 228

  Fly   416 EFEVLDGEDILPKDVYKSDNVLSKLVRNTVDGISKSLGMGG-DQALDSSTTSSSTTTTTRAPFTT 479
                                  .:|:         :||.|. ...||..|...:.|         
  Rat   229 ----------------------ERLI---------TLGFGNITIVLDDHTPQCNCT--------- 253

  Fly   480 PNYQWHSTTMARKLKKFITSATTAATTAAGSSSTASSTTTISPTISSTTIPSTTISSTTISSSTT 544
                                                                             
  Rat   254 ----------------------------------------------------------------- 253

  Fly   545 FSPFSPSTTTTTTTTAAALNLETSGSESPFGGLQRILSSAAPPSLAPVDGFGSASAATPTSGSGA 609
                                                     ||:|.                   
  Rat   254 -----------------------------------------PPALC------------------- 258

  Fly   610 GSFVDSFLASTLSPASSTEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIY 674
                                                                             
  Rat   259 ----------------------------------------------------------------- 258

  Fly   675 PAALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDE 739
             :|||..|                  |    |||||.|||.::.:.:|||:||:|||.......:
  Rat   259 -SALSHGI------------------Y----YLYPFNIEYQILASTMLYVLWKNIGRRVDSSRHQ 300

  Fly   740 DLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLV----RHQQF 800
            .::.|.:.:|                  |||    ..||.:|...:..::::.:.:    ...:.
  Rat   301 KMQCRFDGVL------------------VGS----VLGLTVLAATIAVVVVYMIHIGRSKSKSES 343

  Fly   801 SLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQS---------NLNDILLRISAFGLF 856
            :|:..||...:..:||..|.|        |.:..:|.:|:|         .|:..||..:|.|.:
  Rat   344 ALIMFYLYAITVLLLMGAAGL--------VGSWIYRVDEKSLDESKNPARKLDADLLVATASGSW 400

  Fly   857 TYSVFSIIAGSLKVLESEP---------SLLVTTTGGVAVFQVILQLLFI------------ADV 900
            ..|..||:|  :...|:.|         |:||       :.:..:|.:||            .||
  Rat   401 LLSWGSILA--IACAETRPPYTWYNLPYSVLV-------IVEKYVQNIFIIESVHLEPEGVPEDV 456

  Fly   901 SRRRV---------------------------------HLPEH--------------------DR 912
            ...||                                 ||.:.                    |.
  Rat   457 RTLRVVTVCSGEAAALAASSLGSQGTAQDGSPAVNGNLHLQQRCEKEDQEADWEGATGTTRCLDF 521

  Fly   913 SKPG------RQIVTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHR 971
            .:.|      |.|..||.:||::::....|..:..:.|.::...:||.||.|:..:.:|..||:|
  Rat   522 LQGGMKRRLLRNITAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYR 586

  Fly   972 FHSAVTLAEIW 982
            .|:|..|.|::
  Rat   587 MHAAAALFEVY 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>405 CDD:281218 36/126 (29%)
Otopetrin <679..972 CDD:281218 79/385 (21%)
Otop1NP_852098.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 9/37 (24%)
Otopetrin 131..586 CDD:281218 128/785 (16%)
putative FYR-box 584..596 5/11 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I4035
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.930

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