DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OtopLa and otpl-3

DIOPT Version :10

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_509170.1 Gene:otpl-3 / 259710 WormBaseID:WBGene00017449 Length:566 Species:Caenorhabditis elegans


Alignment Length:904 Identity:152/904 - (16%)
Similarity:269/904 - (29%) Gaps:433/904 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ELWTSLFI--VTSLVYAILLIVVCIAYVISDV-----TTHRLPVLYYETFFTYLYGVSILFLLYV 181
            :.|:..::  :.:..|||.:::..|...:|::     .|.::.:... ...|:|.|.||||:.|.
 Worm    41 DAWSRAYVFRLFTCFYAIFIVIAGIVIELSNIIAAEENTGKISIKDL-VLGTWLLGGSILFIAYC 104

  Fly   182 --------FCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAA 238
                    |....|..|..|.|...::|                                     
 Worm   105 SYLVHDMHFTIKRQRISLRNSGISATEP------------------------------------- 132

  Fly   239 YQHTLAKFLEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFE 303
                           ||.             ::.:.||.:||:|.:.||:..::|..|    .|.
 Worm   133 ---------------EVL-------------ANTSTGSLYLRLGCVVFGIIGVVYYLL----IFV 165

  Fly   304 IPF------DSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICV 362
            |..      :..| .::..|..::..:|.|:||:|::.|.::.......:|||||||:..||:.:
 Worm   166 ICLLGWSSNEGEC-SVISDVLNVMAAVFIFVQMWFVYCNGKIIFTGDGNLARFGLMHLTGTNLWM 229

  Fly   363 WIRTLVKESLLEI-TIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDIL 426
            |:|.::.|.:..: .|.|.::...:.||:..|.:.:.|.:                         
 Worm   230 WLRYILYEEVETVKEIRHVQHANLSKASAHHHEVHEEACK------------------------- 269

  Fly   427 PKDVYKSDNVLSKLVRNTVDGISKSLGMGGDQALDSSTTSSSTTTTTRAPFTTPNYQWHSTTMAR 491
                                                                             
 Worm   270 ----------------------------------------------------------------- 269

  Fly   492 KLKKFITSATTAATTAAGSSSTASSTTTISPTISSTTIPSTTISSTTISSSTTFSPFSPSTTTTT 556
                                                                             
 Worm   270 ----------------------------------------------------------------- 269

  Fly   557 TTTAAALNLETSGSESPFGGLQRILSSAAPPSLAPVDGFGSASAATPTSGSGAGSFVDSFLASTL 621
                                                                             
 Worm   270 ----------------------------------------------------------------- 269

  Fly   622 SPASSTEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIYPAALSSNIGTLN 686
                   |...|.|                  |:.|                             
 Worm   270 -------GVLCIFN------------------GYNE----------------------------- 280

  Fly   687 STACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSR 751
                               ::|..::|||||.|.|.:|.|.::    .|:..|.:|.:::    :
 Worm   281 -------------------FMYTCVVEYSLICAGVAFVFWANL----ERLKREQMEKKMK----K 318

  Fly   752 RAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADAS----- 811
            |::.        ::||..:::|||.|...::..:|.:.||            ..|.:|.:     
 Worm   319 RSIL--------KIDCSRTAEGLFAGFACIIVTIIAIALF------------NAYSSDKNVAQWI 363

  Fly   812 -HCILMAFAILA---IIVGFIRVKNLKFRCEEQSNLND-------ILLRISAFGLFTYSVFSIIA 865
             .|..|:|.:::   ::..|.|::.|||..|:....:|       |||.:...|...:|:..|::
 Worm   364 FSCTNMSFFLVSTFLVVFAFWRMRYLKFLMEDDDEEDDNAELLDRILLVVGLIGELIFSIGGILS 428

  Fly   866 GSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHD--RSKPGRQIVTFLLICNV 928
            ....:....| |::.||..:.:.||..|...:...||.|:......  |.|||:|::|.||:.|.
 Worm   429 FINNMTIGLP-LIIFTTNVLRLIQVTFQSCLLMVASRLRIEESNQHMLRYKPGKQVITMLLMMNC 492

  Fly   929 AMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYK 987
            |.|.:..|||||...|...:..||...|:|:.|...||.||:||||:...|||||.|::
 Worm   493 AQFMMNVFEAQKAGINDEMIHMYGSYYWAIVVRGCSPLTIFYRFHSSACFAEIWKKTFR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>425 CDD:460840 35/153 (23%)
Otopetrin <673..972 CDD:460840 77/316 (24%)
otpl-3NP_509170.1 Otopetrin 144..536 CDD:460840 117/718 (16%)

Return to query results.
Submit another query.