DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and otpl-3

DIOPT Version :9

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_509170.1 Gene:otpl-3 / 259710 WormBaseID:WBGene00017449 Length:566 Species:Caenorhabditis elegans


Alignment Length:904 Identity:152/904 - (16%)
Similarity:269/904 - (29%) Gaps:433/904 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ELWTSLFI--VTSLVYAILLIVVCIAYVISDV-----TTHRLPVLYYETFFTYLYGVSILFLLYV 181
            :.|:..::  :.:..|||.:::..|...:|::     .|.::.:... ...|:|.|.||||:.|.
 Worm    41 DAWSRAYVFRLFTCFYAIFIVIAGIVIELSNIIAAEENTGKISIKDL-VLGTWLLGGSILFIAYC 104

  Fly   182 --------FCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAA 238
                    |....|..|..|.|...::|                                     
 Worm   105 SYLVHDMHFTIKRQRISLRNSGISATEP------------------------------------- 132

  Fly   239 YQHTLAKFLEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFE 303
                           ||.             ::.:.||.:||:|.:.||:..::|..|    .|.
 Worm   133 ---------------EVL-------------ANTSTGSLYLRLGCVVFGIIGVVYYLL----IFV 165

  Fly   304 IPF------DSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICV 362
            |..      :..| .::..|..::..:|.|:||:|::.|.::.......:|||||||:..||:.:
 Worm   166 ICLLGWSSNEGEC-SVISDVLNVMAAVFIFVQMWFVYCNGKIIFTGDGNLARFGLMHLTGTNLWM 229

  Fly   363 WIRTLVKESLLEI-TIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDIL 426
            |:|.::.|.:..: .|.|.::...:.||:..|.:.:.|.:                         
 Worm   230 WLRYILYEEVETVKEIRHVQHANLSKASAHHHEVHEEACK------------------------- 269

  Fly   427 PKDVYKSDNVLSKLVRNTVDGISKSLGMGGDQALDSSTTSSSTTTTTRAPFTTPNYQWHSTTMAR 491
                                                                             
 Worm   270 ----------------------------------------------------------------- 269

  Fly   492 KLKKFITSATTAATTAAGSSSTASSTTTISPTISSTTIPSTTISSTTISSSTTFSPFSPSTTTTT 556
                                                                             
 Worm   270 ----------------------------------------------------------------- 269

  Fly   557 TTTAAALNLETSGSESPFGGLQRILSSAAPPSLAPVDGFGSASAATPTSGSGAGSFVDSFLASTL 621
                                                                             
 Worm   270 ----------------------------------------------------------------- 269

  Fly   622 SPASSTEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIYPAALSSNIGTLN 686
                   |...|.|                  |:.|                             
 Worm   270 -------GVLCIFN------------------GYNE----------------------------- 280

  Fly   687 STACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSR 751
                               ::|..::|||||.|.|.:|.|.::    .|:..|.:|.:::    :
 Worm   281 -------------------FMYTCVVEYSLICAGVAFVFWANL----ERLKREQMEKKMK----K 318

  Fly   752 RAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADAS----- 811
            |::.        ::||..:::|||.|...::..:|.:.||            ..|.:|.:     
 Worm   319 RSIL--------KIDCSRTAEGLFAGFACIIVTIIAIALF------------NAYSSDKNVAQWI 363

  Fly   812 -HCILMAFAILA---IIVGFIRVKNLKFRCEEQSNLND-------ILLRISAFGLFTYSVFSIIA 865
             .|..|:|.:::   ::..|.|::.|||..|:....:|       |||.:...|...:|:..|::
 Worm   364 FSCTNMSFFLVSTFLVVFAFWRMRYLKFLMEDDDEEDDNAELLDRILLVVGLIGELIFSIGGILS 428

  Fly   866 GSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHD--RSKPGRQIVTFLLICNV 928
            ....:....| |::.||..:.:.||..|...:...||.|:......  |.|||:|::|.||:.|.
 Worm   429 FINNMTIGLP-LIIFTTNVLRLIQVTFQSCLLMVASRLRIEESNQHMLRYKPGKQVITMLLMMNC 492

  Fly   929 AMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYK 987
            |.|.:..|||||...|...:..||...|:|:.|...||.||:||||:...|||||.|::
 Worm   493 AQFMMNVFEAQKAGINDEMIHMYGSYYWAIVVRGCSPLTIFYRFHSSACFAEIWKKTFR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>405 CDD:281218 35/133 (26%)
Otopetrin <679..972 CDD:281218 77/310 (25%)
otpl-3NP_509170.1 Otopetrin 144..536 CDD:281218 117/718 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.910

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