DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and otpl-6

DIOPT Version :9

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_505195.1 Gene:otpl-6 / 185807 WormBaseID:WBGene00018479 Length:581 Species:Caenorhabditis elegans


Alignment Length:899 Identity:175/899 - (19%)
Similarity:292/899 - (32%) Gaps:371/899 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 ITVQGTYETNPITGPIELWT-----SLFIVTSL--VYAILLIVVCIAYVISDVTTHRLPVLYYET 165
            :||...| ::.|...:..||     ..|.:.||  :|.::|.:|.....||.........:.|..
 Worm    20 VTVLTDY-SSTIPENLPAWTKNTKAQSFGLKSLTALYTLILTIVAFIIEISPTWQSESMNIEYTI 83

  Fly   166 FFTYLYGVSILFLLYVFCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDS 230
            |...:|.::||:.:|::.::|                                            
 Worm    84 FCVLMYSIAILYFIYLYAYIL-------------------------------------------- 104

  Fly   231 GKAAKGAAYQ---HTLAKFLEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFG-LGAM 291
                    |.   :|:..:||......|....:.|:.......: ..|:.:||:|.:.|| ||::
 Worm   105 --------YPIVFNTILLYLERMRVLNVHTVKRWVQPEPVFTGE-GAGTLYLRLGTVLFGTLGSV 160

  Fly   292 IYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVV 356
            :: |.|....|   |....|:|.: |..:|..:||::||:|:..|:::::.:...:|.||:||.|
 Worm   161 LW-GCEIFLCF---FTETRHNIYV-VKYILAFLFTYLQMHFLCCNSKIDLPKNNFLASFGMMHCV 220

  Fly   357 ATNICVWIRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLD 421
            |.|:.||.      ||                                                 
 Worm   221 AVNLWVWF------SL------------------------------------------------- 230

  Fly   422 GEDILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDQALDSSTTSSSTTTTTRAPFTTPNYQWHS 486
               .|.|.|||||....||.:                                   ....|:   
 Worm   231 ---CLAKAVYKSDKKTLKLQK-----------------------------------AEEKYK--- 254

  Fly   487 TTMARKLKKFITSATTAATTAAGSSSTASSTTTISPTISSTTIPSTTISSTTISSSTTFSPFSPS 551
                   ||.:|.....|.|.         ||||:..:||             .||:.|      
 Worm   255 -------KKNMTITEAVAETI---------TTTIASIVSS-------------ESSSGF------ 284

  Fly   552 TTTTTTTTAAALNLETSGSESPFGGLQRILSSAAPPSLAPVDGFGSASAATPTSGSGAGSFVDSF 616
                            ...|.....|.::               |||:               :|
 Worm   285 ----------------RADEKQLRSLYKL---------------GSAA---------------NF 303

  Fly   617 LASTLSPASSTEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIYPAALSSN 681
            |.:|:                                                            
 Worm   304 LLTTM------------------------------------------------------------ 308

  Fly   682 IGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRLE 746
                                          :|:|||.|.|.:::|||.|.               
 Worm   309 ------------------------------VEFSLIAAAVYFIVWKHEGE--------------- 328

  Fly   747 VMLSRRAVAMAQQARSG--RVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLAD 809
                    ...|.||..  |.||..:|.|:|..::||:|:.|.:.:.:: ..:......|..:..
 Worm   329 --------QTPQDARKKHVRFDCKSTSVGIFAAIVLLIGSFISIAMHYI-YNNSDMPRTADEVIG 384

  Fly   810 ASHCILMAFAILAIIVGFIRVKNLKFRCEEQSN-LNDILLRISAFGLFTYSVFSIIAGSLKVLES 873
            .:..:|....:||:...|||::.|::|...... :::|||.:...|...|....:.......||:
 Worm   385 IAETVLFCVCLLAVFGAFIRMRKLQYRLHAHGQVVDEILLIVGLAGEIVYCSTGLDLYLNGRLEN 449

  Fly   874 EP--SLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTF 936
            .|  |.|......:.:.||::|.:||...||.|.....:..::||:||||||::||:.:|..:||
 Worm   450 TPGTSCLTVVAFVMRIVQVVVQSVFILVASRLRSLSASNISNQPGKQIVTFLVVCNINLFIYHTF 514

  Fly   937 EA-QKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKAR 989
            |. :..|..|.::...    :|.:..|:.||.:|:||||:..||||||..|..:
 Worm   515 ETIESNFGFPHKMSSV----YSALLNISSPLVVFYRFHSSACLAEIWKHAYSKK 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>405 CDD:281218 33/127 (26%)
Otopetrin <679..972 CDD:281218 71/298 (24%)
otpl-6NP_505195.1 Otopetrin 146..547 CDD:281218 136/700 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I2171
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I2203
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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