DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and otpl-4

DIOPT Version :9

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_505202.2 Gene:otpl-4 / 185805 WormBaseID:WBGene00018477 Length:558 Species:Caenorhabditis elegans


Alignment Length:731 Identity:133/731 - (18%)
Similarity:201/731 - (27%) Gaps:340/731 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 FFLRVGAIAFGLGAMIYIGLE-FGSFFEIPFDSPCHHILIGVNP-------LLQMIFTFMQMYFI 333
            ||||:|||.|.:||::...:| |.:|.:            .|.|       .|.:||...|:.|:
 Worm    86 FFLRLGAIFFSIGAIVLWSIELFLAFAQ------------SVRPWICILRTCLYIIFHVTQVVFV 138

  Fly   334 FMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQH 398
            .::.|:..|..::|..|||.|.:|.|:.:|....:.:|    .|.:.:||       ..|.:..|
 Worm   139 SISHRVEFHYHRMIVYFGLSHTIAVNLWIWASLCIAKS----GIGNNQNE-------TYHIVFDH 192

  Fly   399 ALRHAGTVLRTHAGP---NSEFEVLDGEDILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDQAL 460
               |:..|:.:...|   |..||             |.:..|     .||    |..|       
 Worm   193 ---HSPWVMHSTDQPIVVNLTFE-------------KYEYTL-----RTV----KYFG------- 225

  Fly   461 DSSTTSSSTTTTTRAPFTTPNYQWHSTTMARKLKKFITSATTAATTAAGSSSTASSTTTISPTIS 525
                       :|...|.|.|.::........|..|.|.|                         
 Worm   226 -----------STSIIFLTLNVEFCLIAFGACLCLFYTIA------------------------- 254

  Fly   526 STTIPSTTISSTTISSSTTFSPFSPSTTTTTTTTAAALNLETSGSESPFGGLQRILSSAAPPSLA 590
                                  :.||............:...:|.....|....|||..:     
 Worm   255 ----------------------WEPSLHDHKKNHYIGFDYRNTGIGMLLGFCMLILSCLS----- 292

  Fly   591 PVDGFGSASAATPTSGSGAGSFVDSFLASTLSPASSTEGSASIMNNLFGQGPMENSFQTYTDLGH 655
                                                                             
 Worm   293 ----------------------------------------------------------------- 292

  Fly   656 EEATGLVSFENLESLDNIYPAALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAV 720
                  |:|.|: ..||.|..|....:|                ::..|.||...     |...:
 Worm   293 ------VAFGNI-LRDNDYQKAAGEVVG----------------IFQLAYYLISI-----LTCGI 329

  Fly   721 VLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVG-- 783
            |...::|||                  :|::..|.      |...|.:...|.:.. :.||||  
 Worm   330 VFQCLFKHI------------------ILNQEFVI------SPNRDLMPHEKNINI-IFLLVGVC 369

  Fly   784 --ALICLILFFVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDI 846
              .:.|.:....::|..|       |.|....::.:|...||                     ::
 Worm   370 GEVMYCCMGLLGVIRGDQ-------LLDTKGIVIASFLTRAI---------------------EV 406

  Fly   847 LLRISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHD 911
            |  |.|..||                    .|:...|.|.....|                    
 Worm   407 L--IQAILLF--------------------YLLKKGGSVEPCDTI-------------------- 429

  Fly   912 RSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSI------IQRITLPLCIFH 970
                |:|.:|||:..|:.:|..:..|.        .:..||| |..|      ..:|.|||.:|.
 Worm   430 ----GKQSITFLIALNMILFGFHAIEG--------SIRTYGF-PTKIDDTSKMFLKICLPLVVFF 481

  Fly   971 RFHSAVTLAEIWKTTY 986
            |||.:|..|||||..|
 Worm   482 RFHCSVCFAEIWKVYY 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>405 CDD:281218 36/134 (27%)
Otopetrin <679..972 CDD:281218 53/302 (18%)
otpl-4NP_505202.2 Otopetrin 87..483 CDD:281218 122/714 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.970

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