DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLa and otop2

DIOPT Version :10

Sequence 1:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster
Sequence 2:XP_017944835.2 Gene:otop2 / 100496174 XenbaseID:XB-GENE-6045877 Length:588 Species:Xenopus tropicalis


Alignment Length:356 Identity:83/356 - (23%)
Similarity:134/356 - (37%) Gaps:113/356 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   706 YLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGS 770
            |||||.|||||..:.:.|||||::||.  .......:|:.:                        
 Frog   270 YLYPFNIEYSLFASAMSYVMWKNVGRV--MSGHHHTQHKFK------------------------ 308

  Fly   771 SKGLFFGLLLLVGALICLILFFVL---------VRHQQFSLLAIYLADASHCILMAFAILA--II 824
            ::.||.||:..:|..:..:..|::         .|.|..::  .|:.:.:...||:...||  ||
 Frog   309 TRNLFVGLICGIGVFVAGLGVFIVYKIEVDVEETRSQAITM--FYIFNITALSLMSVVSLAGTII 371

  Fly   825 VGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSIIA-------GSLKVLESEPSLLVTTT 882
            ..|.: :::.........|:.:||..:|.|.:..|.|||:|       |.|..|....:||:   
 Frog   372 YRFYK-RDMDNHKNPTRTLDVVLLLGAALGQYCISFFSIVAMVALQPGGQLHTLILVNALLL--- 432

  Fly   883 GGVAVFQVILQLLFIADVSRRRVHLPEHD------------------------------------ 911
                :.|..:|..||.:...|:.|...|.                                    
 Frog   433 ----IVQHTIQNTFIIEGLHRQPHANSHPAADLQEKDQPPHVYINPAATVSHSDHSPSSHEKHEH 493

  Fly   912 ----------------------RSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFV 954
                                  |.|..::|..|||:.|:..:.:..|.|:..|.|.::|.|||:.
 Frog   494 ELETKHHGTPTGFPECHSKSDWRRKALKEISLFLLVSNIIFWIMPAFGARPQFDNRLELNFYGYT 558

  Fly   955 PWSIIQRITLPLCIFHRFHSAVTLAEIWKTT 985
             |..|..|.||..||:|.|:..:|.|::..|
 Frog   559 -WVAIVNIGLPFGIFYRMHAIASLVEVYIMT 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLaNP_001162676.1 Otopetrin 278..>425 CDD:460840
Otopetrin <673..972 CDD:460840 78/341 (23%)
otop2XP_017944835.2 Otopetrin 134..574 CDD:460840 78/340 (23%)
Blue background indicates that the domain is not in the aligned region.

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