DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mgl and lrp10

DIOPT Version :9

Sequence 1:NP_001096924.2 Gene:mgl / 8674055 FlyBaseID:FBgn0261260 Length:4769 Species:Drosophila melanogaster
Sequence 2:XP_688859.4 Gene:lrp10 / 560361 ZFINID:ZDB-GENE-140418-2 Length:748 Species:Danio rerio


Alignment Length:686 Identity:135/686 - (19%)
Similarity:205/686 - (29%) Gaps:278/686 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 HSSSAIDRR---LQQQQHHQSPQHHRQRGQLTTLALLLLALVAISNLETLLAVRTEGPRNRHGSP 139
            ||...:..|   :....:|..|.|......|.|..:....:::.|........:........|||
Zfish    32 HSPKILQSRQGEIHNSPYHSWPYHTLNCSWLITSKVGERVIISFSQFNMRCGRQWVSVVPLTGSP 96

  Fly   140 ----GGSLAS----TGGS-----------------------SSGINTECPTDSFRCNNGKCISHH 173
                |..|.:    |||:                       .||   .|....|.|.:.:|:...
Zfish    97 FKLCGSQLPAPFEMTGGNITVTHHFIPHIFPVTGFRLSYFKDSG---PCFPGEFECYSERCLPAS 158

  Fly   174 WVCNYQKDC----------DDG--------EDEMQSCPPPECETPQLN----------------- 203
            |.||.:.:|          :||        ::.:...||.|..|..::                 
Zfish   159 WRCNGRVECLGVGDELGSDEDGCYSPEPPIDNSLNDLPPFETTTSTISLLSTDAPPPKIPDFPLL 223

  Fly   204 -----CGQY-------------TFNKTYCI------------------------------PPHYR 220
                 ||.|             |..|..|:                              .|:..
Zfish   224 PQGGPCGGYLKAFYGSFTPPVPTGQKMECVWTVDPQDSRPLKLELQQLDLGVKDLITITDQPYGM 288

  Fly   221 CDMIE-----------DCEDKSDEAQCTYRK------------------CQHTDLFCNTPTGAPA 256
            .::|:           :.|.::......||:                  |...:..|        
Zfish   289 GNIIKTITFVSNNKAVEVESRTGLLSLIYRREPVLEGRGFNATYRITDYCLPWEELC-------- 345

  Fly   257 EGARLTGPCVPKEKRCDGYLDC-RTGRDEVGCSGVACRLDQFRCA-NGLK----------CIDAA 309
             |..| |.|...::||||:.|| .||.||..|.|  |:...|.|| .|:|          |....
Zfish   346 -GGSL-GGCYTADQRCDGHWDCPETGLDEEACWG--CKAGSFLCAMGGIKKAGHQTENPVCYSFH 406

  Fly   310 LKCNHRDDCGDNSDEQGCNFPPCHHAQFRCTNALCIPYNFHCDGYHDCADKSDEANCTAIACPDN 374
            .:||::.:|.|.:||:.|              .:|.|..||||        ||            
Zfish   407 ERCNYQLNCPDGTDEREC--------------TICQPGTFHCD--------SD------------ 437

  Fly   375 KHLCPRGGASGTPKCILKSQLCDGKRDCEDGSDEETNCSIASCP------ALSCEFKCGPSLTGG 433
                         :|:.:|..|||:.||:||:| |.||: |:.|      |......||..|...
Zfish   438 -------------RCVFESWRCDGQVDCKDGTD-ELNCT-ATLPRKVITAATVGSLVCGLLLVIA 487

  Fly   434 V-CYCK-------PGQSLAPDNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQG-------YTL 483
            : |.||       .....||..|...:|           :......||....|||       :..
Zfish   488 MGCTCKLYSLRTREYSLFAPITRQEAEL-----------IQQQAPPSYGQLIAQGIIPPVEDFPT 541

  Fly   484 INDSKCIAPDANNLQLIFAHD---------------RAIMRMLPHGSEPKILA--NATAAAGVTF 531
            .|.::.::.....:..:...|               ||:.|:...|..|:..:  ..|.|:....
Zfish   542 ENPNETVSLSLRGILQLLRQDNASSLRRRRRPRFVRRAVRRLRRWGLIPRATSRPTQTTASSSQQ 606

  Fly   532 HYARNTLYWSDIKTRKVQSLPLDAQNKAVSPFDQTL 567
            ..|.|:      .|:..||.| .|.:.|...|.|:|
Zfish   607 TEAANS------STQPSQSSP-GASSVATEAFSQSL 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mglNP_001096924.2 LDLa 157..189 CDD:238060 10/49 (20%)
LDLa 204..236 CDD:238060 9/85 (11%)
LDLa 292..327 CDD:238060 13/45 (29%)
LDLa 332..366 CDD:238060 8/33 (24%)
LDLa 371..412 CDD:238060 11/40 (28%)
vWFA <447..488 CDD:294047 8/47 (17%)
NHL 573..>716 CDD:302697
NHL repeat 573..610 CDD:271320
NHL repeat 616..654 CDD:271320
NHL repeat 657..693 CDD:271320
FXa_inhibition 763..805 CDD:291342
LY 922..964 CDD:214531
LY 973..1007 CDD:214531
Ldl_recept_a 1188..1223 CDD:278486
LDLa 1227..1259 CDD:197566
LDLa 1268..1303 CDD:238060
LDLa 1308..1343 CDD:238060
LDLa 1356..1387 CDD:238060
LDLa 1391..1423 CDD:197566
LDLa 1435..1469 CDD:197566
FXa_inhibition 1478..1513 CDD:291342
FXa_inhibition 1522..1553 CDD:291342
LY 1625..1665 CDD:214531
LY 1667..1711 CDD:214531
Ldl_recept_b 1690..1728 CDD:278487
LY 1712..1754 CDD:214531
LY 1986..2037 CDD:214531
FXa_inhibition 2151..>2179 CDD:291342
LY 2259..2305 CDD:214531
Ldl_recept_b 2326..2366 CDD:278487
LY 2352..2392 CDD:214531
NHL 2579..>2711 CDD:302697
NHL repeat 2593..2622 CDD:271320
NHL repeat 2634..2678 CDD:271320
LY 2671..2713 CDD:214531
LDLa 2867..2901 CDD:238060
LDLa 2906..2941 CDD:238060
LDLa 2950..2983 CDD:238060
LDLa 3034..3066 CDD:197566
LDLa 3080..3115 CDD:197566
LDLa 3128..3159 CDD:238060
LDLa 3170..3204 CDD:238060
LDLa 3210..3242 CDD:197566
cEGF 3269..3292 CDD:289433
vWFA <3284..3324 CDD:294047
LY 3362..3394 CDD:214531
LY 3406..3448 CDD:214531
LY 3498..3536 CDD:214531
LY 3536..3578 CDD:214531
FXa_inhibition 3607..3659 CDD:291342
LDLa 3663..3696 CDD:238060
LDLa 3705..3739 CDD:238060
LDLa 3743..3775 CDD:197566
LDLa 3784..3817 CDD:197566
LDLa 3827..3861 CDD:197566
LDLa 3871..3901 CDD:197566
LDLa 3913..3947 CDD:238060
LDLa 3952..3986 CDD:238060
LDLa 3996..4027 CDD:197566
LDLa 4043..4071 CDD:238060
LDLa 4086..4117 CDD:238060
EGF_CA 4163..4194 CDD:214542
NHL 4276..>4426 CDD:302697
NHL repeat 4291..4336 CDD:271320
Ldl_recept_b 4350..4390 CDD:278487
NHL repeat 4376..4422 CDD:271320
lrp10XP_688859.4 CUB 36..136 CDD:238001 15/99 (15%)
LDLa 142..181 CDD:238060 9/38 (24%)
CUB 229..334 CDD:294042 11/104 (11%)
LDLa 427..461 CDD:238060 19/67 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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