Sequence 1: | NP_001096924.2 | Gene: | mgl / 8674055 | FlyBaseID: | FBgn0261260 | Length: | 4769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005155618.1 | Gene: | vldlr / 393897 | ZFINID: | ZDB-GENE-040426-803 | Length: | 877 | Species: | Danio rerio |
Alignment Length: | 822 | Identity: | 306/822 - (37%) |
---|---|---|---|
Similarity: | 423/822 - (51%) | Gaps: | 106/822 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 2867 CSPNEFRCNNGRCIFKSWKCDHENDCKDGSDELGCVYPPCVDGEFTCANGRCIPQAQVCNGVNDC 2931
Fly 2932 KDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNS 2996
Fly 2997 FRC--PNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCDNGNCIPRIYICDGDND 3059
Fly 3060 CLDNSDEDNRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDCVDGADENTTL--HNC 3122
Fly 3123 ATQQPCGEDMFTCGNGRCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEFTCQNFKCIRNQS 3187
Fly 3188 RCDGEDDCGDHSDEVGCAKENIT-C-PQGQFACTNGQCIDYNLVCNKYPDCADESDEP-AHCNVD 3249
Fly 3250 ECAKVEINQ--CGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFY 3312
Fly 3313 CKCDETYYERQNDEHT--CKRKDKIPPWLIFTNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIR 3375
Fly 3376 EEYMYFCDVTAKTIFRAKYGEADDEMPPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDV 3440
Fly 3441 SELDGSKRKTL-RSGVVDPRAIVVHPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWP 3504
Fly 3505 NALSIDYFTDRIYWADAHLDYIAYADLEGRHRHTVL-SGSKVPHVFALSLFDDYIYWSDWNLKAI 3568
Fly 3569 VRANKFHGANYTVLRNTTHRPYDLHINHPLRQLPYTNPCG--TNNGGCSHLCLIAPPPESTYLNI 3631
Fly 3632 EGYIEEGAPIFKCACPNQFYLARDMKTCVANCTAGQHLCGGR 3673 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mgl | NP_001096924.2 | LDLa | 157..189 | CDD:238060 | |
LDLa | 204..236 | CDD:238060 | |||
LDLa | 292..327 | CDD:238060 | |||
LDLa | 332..366 | CDD:238060 | |||
LDLa | 371..412 | CDD:238060 | |||
vWFA | <447..488 | CDD:294047 | |||
NHL | 573..>716 | CDD:302697 | |||
NHL repeat | 573..610 | CDD:271320 | |||
NHL repeat | 616..654 | CDD:271320 | |||
NHL repeat | 657..693 | CDD:271320 | |||
FXa_inhibition | 763..805 | CDD:291342 | |||
LY | 922..964 | CDD:214531 | |||
LY | 973..1007 | CDD:214531 | |||
Ldl_recept_a | 1188..1223 | CDD:278486 | |||
LDLa | 1227..1259 | CDD:197566 | |||
LDLa | 1268..1303 | CDD:238060 | |||
LDLa | 1308..1343 | CDD:238060 | |||
LDLa | 1356..1387 | CDD:238060 | |||
LDLa | 1391..1423 | CDD:197566 | |||
LDLa | 1435..1469 | CDD:197566 | |||
FXa_inhibition | 1478..1513 | CDD:291342 | |||
FXa_inhibition | 1522..1553 | CDD:291342 | |||
LY | 1625..1665 | CDD:214531 | |||
LY | 1667..1711 | CDD:214531 | |||
Ldl_recept_b | 1690..1728 | CDD:278487 | |||
LY | 1712..1754 | CDD:214531 | |||
LY | 1986..2037 | CDD:214531 | |||
FXa_inhibition | 2151..>2179 | CDD:291342 | |||
LY | 2259..2305 | CDD:214531 | |||
Ldl_recept_b | 2326..2366 | CDD:278487 | |||
LY | 2352..2392 | CDD:214531 | |||
NHL | 2579..>2711 | CDD:302697 | |||
NHL repeat | 2593..2622 | CDD:271320 | |||
NHL repeat | 2634..2678 | CDD:271320 | |||
LY | 2671..2713 | CDD:214531 | |||
LDLa | 2867..2901 | CDD:238060 | 18/33 (55%) | ||
LDLa | 2906..2941 | CDD:238060 | 7/34 (21%) | ||
LDLa | 2950..2983 | CDD:238060 | 9/32 (28%) | ||
LDLa | 3034..3066 | CDD:197566 | 14/31 (45%) | ||
LDLa | 3080..3115 | CDD:197566 | 13/34 (38%) | ||
LDLa | 3128..3159 | CDD:238060 | 14/30 (47%) | ||
LDLa | 3170..3204 | CDD:238060 | 13/33 (39%) | ||
LDLa | 3210..3242 | CDD:197566 | 16/33 (48%) | ||
cEGF | 3269..3292 | CDD:289433 | 11/22 (50%) | ||
vWFA | <3284..3324 | CDD:294047 | 19/39 (49%) | ||
LY | 3362..3394 | CDD:214531 | 11/31 (35%) | ||
LY | 3406..3448 | CDD:214531 | 13/41 (32%) | ||
LY | 3498..3536 | CDD:214531 | 14/37 (38%) | ||
LY | 3536..3578 | CDD:214531 | 19/42 (45%) | ||
FXa_inhibition | 3607..3659 | CDD:291342 | 18/53 (34%) | ||
LDLa | 3663..3696 | CDD:238060 | 3/11 (27%) | ||
LDLa | 3705..3739 | CDD:238060 | |||
LDLa | 3743..3775 | CDD:197566 | |||
LDLa | 3784..3817 | CDD:197566 | |||
LDLa | 3827..3861 | CDD:197566 | |||
LDLa | 3871..3901 | CDD:197566 | |||
LDLa | 3913..3947 | CDD:238060 | |||
LDLa | 3952..3986 | CDD:238060 | |||
LDLa | 3996..4027 | CDD:197566 | |||
LDLa | 4043..4071 | CDD:238060 | |||
LDLa | 4086..4117 | CDD:238060 | |||
EGF_CA | 4163..4194 | CDD:214542 | |||
NHL | 4276..>4426 | CDD:302697 | |||
NHL repeat | 4291..4336 | CDD:271320 | |||
Ldl_recept_b | 4350..4390 | CDD:278487 | |||
NHL repeat | 4376..4422 | CDD:271320 | |||
vldlr | XP_005155618.1 | LDLa | 29..63 | CDD:238060 | 18/33 (55%) |
LDLa | 67..99 | CDD:197566 | 15/76 (20%) | ||
Ldl_recept_a | 107..145 | CDD:278486 | 18/41 (44%) | ||
Ldl_recept_a | 149..184 | CDD:278486 | 16/37 (43%) | ||
Ldl_recept_a | 234..269 | CDD:278486 | 17/35 (49%) | ||
Ldl_recept_a | 272..308 | CDD:278486 | 13/35 (37%) | ||
LDLa | 316..346 | CDD:238060 | 14/29 (48%) | ||
FXa_inhibition | 356..390 | CDD:291342 | 15/37 (41%) | ||
EGF_CA | 392..426 | CDD:214542 | 19/37 (51%) | ||
NHL | 479..>570 | CDD:302697 | 31/95 (33%) | ||
LY | 504..541 | CDD:214531 | 12/36 (33%) | ||
NHL repeat | 511..551 | CDD:271320 | 16/39 (41%) | ||
Ldl_recept_b | 564..604 | CDD:278487 | 17/41 (41%) | ||
LY | 588..630 | CDD:214531 | 15/42 (36%) | ||
Ldl_recept_b | 651..690 | CDD:278487 | 14/38 (37%) | ||
FXa_inhibition | 707..745 | CDD:291342 | 17/48 (35%) | ||
Mucin | <723..817 | CDD:250634 | 12/37 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |