Sequence 1: | NP_001096924.2 | Gene: | mgl / 8674055 | FlyBaseID: | FBgn0261260 | Length: | 4769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_037287.2 | Gene: | Vldlr / 25696 | RGDID: | 3963 | Length: | 873 | Species: | Rattus norvegicus |
Alignment Length: | 822 | Identity: | 306/822 - (37%) |
---|---|---|---|
Similarity: | 418/822 - (50%) | Gaps: | 124/822 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 2867 CSPNEFRCNNGRCIFKSWKCDHENDCKDGSDELGCVYPPCVDGEFTCANGRCIPQAQVCNGVNDC 2931
Fly 2932 KDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNS 2996
Fly 2997 FRC--PNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCDNGNCIPRIYICDGDND 3059
Fly 3060 CLDNSDEDNRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDCVDGADENTTLHNCAT 3124
Fly 3125 QQP-----CGEDMFTCGNGRCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEFTCQNFKCIR 3184
Fly 3185 NQSRCDGEDDCGDHSDEVGCAKENITCPQGQFACTNGQCIDYNLVCNKYPDCADESDEP-AHCNV 3248
Fly 3249 DECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFYC 3313
Fly 3314 KCDETYYERQNDEHT--CKRKDKIPPWLIFTNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIRE 3376
Fly 3377 EYMYFCDVTAKTIFRAKYGEADDEMPPEREAVIRH-----DSHGLEGIAIDWVGRKLYWLDRHSK 3436
Fly 3437 NLDVSELDGSKRKTL-RSGVVDPRAIVVHPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILNWNDG 3500
Fly 3501 IAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHRHTVLSGSK-VPHVFALSLFDDYIYWSDWN 3564
Fly 3565 LKAIVRANKFHGANYTVLRNTTHRPYDLHINHPLRQLPYTNPCGTN-------NGGCSHLCLIAP 3622
Fly 3623 PPESTYLNIEGYIEEGAPIFKCACPNQFYLARDMKTCVANCT 3664 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mgl | NP_001096924.2 | LDLa | 157..189 | CDD:238060 | |
LDLa | 204..236 | CDD:238060 | |||
LDLa | 292..327 | CDD:238060 | |||
LDLa | 332..366 | CDD:238060 | |||
LDLa | 371..412 | CDD:238060 | |||
vWFA | <447..488 | CDD:294047 | |||
NHL | 573..>716 | CDD:302697 | |||
NHL repeat | 573..610 | CDD:271320 | |||
NHL repeat | 616..654 | CDD:271320 | |||
NHL repeat | 657..693 | CDD:271320 | |||
FXa_inhibition | 763..805 | CDD:291342 | |||
LY | 922..964 | CDD:214531 | |||
LY | 973..1007 | CDD:214531 | |||
Ldl_recept_a | 1188..1223 | CDD:278486 | |||
LDLa | 1227..1259 | CDD:197566 | |||
LDLa | 1268..1303 | CDD:238060 | |||
LDLa | 1308..1343 | CDD:238060 | |||
LDLa | 1356..1387 | CDD:238060 | |||
LDLa | 1391..1423 | CDD:197566 | |||
LDLa | 1435..1469 | CDD:197566 | |||
FXa_inhibition | 1478..1513 | CDD:291342 | |||
FXa_inhibition | 1522..1553 | CDD:291342 | |||
LY | 1625..1665 | CDD:214531 | |||
LY | 1667..1711 | CDD:214531 | |||
Ldl_recept_b | 1690..1728 | CDD:278487 | |||
LY | 1712..1754 | CDD:214531 | |||
LY | 1986..2037 | CDD:214531 | |||
FXa_inhibition | 2151..>2179 | CDD:291342 | |||
LY | 2259..2305 | CDD:214531 | |||
Ldl_recept_b | 2326..2366 | CDD:278487 | |||
LY | 2352..2392 | CDD:214531 | |||
NHL | 2579..>2711 | CDD:302697 | |||
NHL repeat | 2593..2622 | CDD:271320 | |||
NHL repeat | 2634..2678 | CDD:271320 | |||
LY | 2671..2713 | CDD:214531 | |||
LDLa | 2867..2901 | CDD:238060 | 19/33 (58%) | ||
LDLa | 2906..2941 | CDD:238060 | 7/34 (21%) | ||
LDLa | 2950..2983 | CDD:238060 | 10/32 (31%) | ||
LDLa | 3034..3066 | CDD:197566 | 15/31 (48%) | ||
LDLa | 3080..3115 | CDD:197566 | 13/34 (38%) | ||
LDLa | 3128..3159 | CDD:238060 | 15/30 (50%) | ||
LDLa | 3170..3204 | CDD:238060 | 14/33 (42%) | ||
LDLa | 3210..3242 | CDD:197566 | 13/31 (42%) | ||
cEGF | 3269..3292 | CDD:289433 | 11/22 (50%) | ||
vWFA | <3284..3324 | CDD:294047 | 18/39 (46%) | ||
LY | 3362..3394 | CDD:214531 | 13/31 (42%) | ||
LY | 3406..3448 | CDD:214531 | 17/46 (37%) | ||
LY | 3498..3536 | CDD:214531 | 13/37 (35%) | ||
LY | 3536..3578 | CDD:214531 | 17/42 (40%) | ||
FXa_inhibition | 3607..3659 | CDD:291342 | 18/58 (31%) | ||
LDLa | 3663..3696 | CDD:238060 | 1/2 (50%) | ||
LDLa | 3705..3739 | CDD:238060 | |||
LDLa | 3743..3775 | CDD:197566 | |||
LDLa | 3784..3817 | CDD:197566 | |||
LDLa | 3827..3861 | CDD:197566 | |||
LDLa | 3871..3901 | CDD:197566 | |||
LDLa | 3913..3947 | CDD:238060 | |||
LDLa | 3952..3986 | CDD:238060 | |||
LDLa | 3996..4027 | CDD:197566 | |||
LDLa | 4043..4071 | CDD:238060 | |||
LDLa | 4086..4117 | CDD:238060 | |||
EGF_CA | 4163..4194 | CDD:214542 | |||
NHL | 4276..>4426 | CDD:302697 | |||
NHL repeat | 4291..4336 | CDD:271320 | |||
Ldl_recept_b | 4350..4390 | CDD:278487 | |||
NHL repeat | 4376..4422 | CDD:271320 | |||
Vldlr | NP_037287.2 | LDLa | 33..67 | CDD:238060 | 19/33 (58%) |
LDLa | 71..103 | CDD:197566 | 16/76 (21%) | ||
Ldl_recept_a | 111..149 | CDD:395011 | 17/39 (44%) | ||
Ldl_recept_a | 153..188 | CDD:395011 | 17/37 (46%) | ||
LDLa | 192..224 | CDD:197566 | 14/38 (37%) | ||
Ldl_recept_a | 237..273 | CDD:395011 | 17/38 (45%) | ||
Ldl_recept_a | 276..312 | CDD:395011 | 15/35 (43%) | ||
Ldl_recept_a | 320..350 | CDD:395011 | 13/29 (45%) | ||
FXa_inhibition | 360..394 | CDD:405372 | 15/35 (43%) | ||
EGF_CA | 396..426 | CDD:214542 | 16/33 (48%) | ||
LDL-receptor class B 1 | 439..480 | 17/41 (41%) | |||
LY | 461..499 | CDD:214531 | 14/40 (35%) | ||
LDL-receptor class B 2 | 481..524 | 14/52 (27%) | |||
Ldl_recept_b | 481..521 | CDD:395012 | 12/49 (24%) | ||
LY | 508..547 | CDD:214531 | 14/38 (37%) | ||
LDL-receptor class B 3 | 525..567 | 18/41 (44%) | |||
LDL-receptor class B 4 | 568..611 | 16/44 (36%) | |||
Ldl_recept_b | 568..608 | CDD:395012 | 15/41 (37%) | ||
LY | 592..634 | CDD:214531 | 13/41 (32%) | ||
LDL-receptor class B 5 | 612..654 | 14/41 (34%) | |||
LDL-receptor class B 6 | 655..697 | 15/41 (37%) | |||
Ldl_recept_b | 655..694 | CDD:395012 | 13/38 (34%) | ||
FXa_inhibition | 706..749 | CDD:405372 | 16/53 (30%) | ||
Clustered O-linked oligosaccharides | 751..790 | 1/4 (25%) | |||
Endocytosis signal. /evidence=ECO:0000255 | 832..837 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |