Sequence 1: | NP_001096924.2 | Gene: | mgl / 8674055 | FlyBaseID: | FBgn0261260 | Length: | 4769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002942891.1 | Gene: | ldlr / 100495826 | XenbaseID: | XB-GENE-962372 | Length: | 894 | Species: | Xenopus tropicalis |
Alignment Length: | 772 | Identity: | 289/772 - (37%) |
---|---|---|---|
Similarity: | 397/772 - (51%) | Gaps: | 105/772 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 2906 CVDGEFTCANGRCIPQAQVCNGVNDCKDNATSDETHERCPMNTTCPANHLKC-EKTNICVEPYWL 2969
Fly 2970 CDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRT 3034
Fly 3035 CFGDLFTCDNGNCIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEETEFTCVENKSWQRAQCIPK 3099
Fly 3100 KWICDGDPDCVDGADENTTLHNC------ATQQPCGEDMFTCGNGRCINKGWICDHDNDCGDGTD 3158
Fly 3159 EGKFCNSKYKTCSAQEFTCQNFKCIRNQSRCDGEDDCGDHSDEVGCAKENITCPQGQ--FACTNG 3221
Fly 3222 QCIDYNLVCNKYPDCADESDEP-AHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGK 3285
Fly 3286 ACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQNDEHT--CKRKDKIPPWLIFTNKYYVR 3348
Fly 3349 NMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYGEADDEMPPEREAVIRHDS 3413
Fly 3414 HGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGSKRKTLRS-GVVDPRAIVVHPGIGYLYFTSWHL 3477
Fly 3478 QAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHRHTVLSG 3542
Fly 3543 -SKVPHVFALSLFDDYIYWSDWNLKAIVRANKFHGANYTVLRNTTHRPYDLHINHPLRQLPYTNP 3606
Fly 3607 CGTN---NGGCSHLCLIAPPPESTYLNIEGYIEEGAPIFKCACPNQFYLARDMKTCV 3660 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mgl | NP_001096924.2 | LDLa | 157..189 | CDD:238060 | |
LDLa | 204..236 | CDD:238060 | |||
LDLa | 292..327 | CDD:238060 | |||
LDLa | 332..366 | CDD:238060 | |||
LDLa | 371..412 | CDD:238060 | |||
vWFA | <447..488 | CDD:294047 | |||
NHL | 573..>716 | CDD:302697 | |||
NHL repeat | 573..610 | CDD:271320 | |||
NHL repeat | 616..654 | CDD:271320 | |||
NHL repeat | 657..693 | CDD:271320 | |||
FXa_inhibition | 763..805 | CDD:291342 | |||
LY | 922..964 | CDD:214531 | |||
LY | 973..1007 | CDD:214531 | |||
Ldl_recept_a | 1188..1223 | CDD:278486 | |||
LDLa | 1227..1259 | CDD:197566 | |||
LDLa | 1268..1303 | CDD:238060 | |||
LDLa | 1308..1343 | CDD:238060 | |||
LDLa | 1356..1387 | CDD:238060 | |||
LDLa | 1391..1423 | CDD:197566 | |||
LDLa | 1435..1469 | CDD:197566 | |||
FXa_inhibition | 1478..1513 | CDD:291342 | |||
FXa_inhibition | 1522..1553 | CDD:291342 | |||
LY | 1625..1665 | CDD:214531 | |||
LY | 1667..1711 | CDD:214531 | |||
Ldl_recept_b | 1690..1728 | CDD:278487 | |||
LY | 1712..1754 | CDD:214531 | |||
LY | 1986..2037 | CDD:214531 | |||
FXa_inhibition | 2151..>2179 | CDD:291342 | |||
LY | 2259..2305 | CDD:214531 | |||
Ldl_recept_b | 2326..2366 | CDD:278487 | |||
LY | 2352..2392 | CDD:214531 | |||
NHL | 2579..>2711 | CDD:302697 | |||
NHL repeat | 2593..2622 | CDD:271320 | |||
NHL repeat | 2634..2678 | CDD:271320 | |||
LY | 2671..2713 | CDD:214531 | |||
LDLa | 2867..2901 | CDD:238060 | |||
LDLa | 2906..2941 | CDD:238060 | 16/34 (47%) | ||
LDLa | 2950..2983 | CDD:238060 | 14/33 (42%) | ||
LDLa | 3034..3066 | CDD:197566 | 2/31 (6%) | ||
LDLa | 3080..3115 | CDD:197566 | 14/34 (41%) | ||
LDLa | 3128..3159 | CDD:238060 | 13/30 (43%) | ||
LDLa | 3170..3204 | CDD:238060 | 15/33 (45%) | ||
LDLa | 3210..3242 | CDD:197566 | 15/33 (45%) | ||
cEGF | 3269..3292 | CDD:289433 | 13/22 (59%) | ||
vWFA | <3284..3324 | CDD:294047 | 18/39 (46%) | ||
LY | 3362..3394 | CDD:214531 | 13/31 (42%) | ||
LY | 3406..3448 | CDD:214531 | 14/41 (34%) | ||
LY | 3498..3536 | CDD:214531 | 13/37 (35%) | ||
LY | 3536..3578 | CDD:214531 | 16/42 (38%) | ||
FXa_inhibition | 3607..3659 | CDD:291342 | 20/54 (37%) | ||
LDLa | 3663..3696 | CDD:238060 | |||
LDLa | 3705..3739 | CDD:238060 | |||
LDLa | 3743..3775 | CDD:197566 | |||
LDLa | 3784..3817 | CDD:197566 | |||
LDLa | 3827..3861 | CDD:197566 | |||
LDLa | 3871..3901 | CDD:197566 | |||
LDLa | 3913..3947 | CDD:238060 | |||
LDLa | 3952..3986 | CDD:238060 | |||
LDLa | 3996..4027 | CDD:197566 | |||
LDLa | 4043..4071 | CDD:238060 | |||
LDLa | 4086..4117 | CDD:238060 | |||
EGF_CA | 4163..4194 | CDD:214542 | |||
NHL | 4276..>4426 | CDD:302697 | |||
NHL repeat | 4291..4336 | CDD:271320 | |||
Ldl_recept_b | 4350..4390 | CDD:278487 | |||
NHL repeat | 4376..4422 | CDD:271320 | |||
ldlr | XP_002942891.1 | Ldl_recept_a | 27..60 | CDD:365841 | 14/32 (44%) |
Ldl_recept_a | 68..106 | CDD:365841 | 16/39 (41%) | ||
LDLa | 111..145 | CDD:238060 | 14/35 (40%) | ||
Ldl_recept_a | 149..185 | CDD:365841 | 21/75 (28%) | ||
Ldl_recept_a | 195..231 | CDD:365841 | 17/36 (47%) | ||
Ldl_recept_a | 235..270 | CDD:365841 | 16/34 (47%) | ||
LDLa | 278..308 | CDD:381805 | 14/29 (48%) | ||
FXa_inhibition | 318..352 | CDD:373209 | 16/35 (46%) | ||
EGF_CA | 354..384 | CDD:214542 | 16/33 (48%) | ||
LY | 419..457 | CDD:214531 | 14/37 (38%) | ||
Ldl_recept_b | 439..482 | CDD:278487 | 13/44 (30%) | ||
Ldl_recept_b | 486..525 | CDD:278487 | 16/38 (42%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 15/41 (37%) | ||
LY | 555..595 | CDD:214531 | 13/41 (32%) | ||
Ldl_recept_b | 616..655 | CDD:278487 | 12/38 (32%) | ||
FXa_inhibition | 674..711 | CDD:373209 | 19/47 (40%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |