DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pif1A and Jakmip1

DIOPT Version :9

Sequence 1:NP_001189195.2 Gene:Pif1A / 8674049 FlyBaseID:FBgn0261015 Length:1264 Species:Drosophila melanogaster
Sequence 2:XP_011239086.1 Gene:Jakmip1 / 76071 MGIID:1923321 Length:851 Species:Mus musculus


Alignment Length:1147 Identity:247/1147 - (21%)
Similarity:416/1147 - (36%) Gaps:355/1147 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 MAKNKLKRKKKLSSSLTSVGDTVNQEKRTRIEGIQLHCRGKLRPKETQSFEAEKGPSAGSQKQLG 122
            |:|....:..|..:...|| ...|:|.|.::..||:            .|:.||......:::|.
Mouse     1 MSKKGRSKGDKPEAETDSV-QMANEELRAKLTNIQI------------EFQQEKSKVGKLRERLQ 52

  Fly   123 KAEKDRERPVIIGGVTTTNVIAAPPQRIKRKLQENMDTIQKLNA-LTEQLRLEVNELKSSLIT-- 184
            :|:.:||                      ::.:.:...|.:|.| |.|:...|:..|:.:||.  
Mouse    53 EAKLERE----------------------QEQRRHTAYISELKAKLHEEKTKELQALREALIRQH 95

  Fly   185 ERGAVRALRAQNDADSRRWKSEVKKLQHTLEMAK--KSNGIKKAIESGPESSGAHVTADGLINYE 247
            |:.|.|..:.:        :.|:::||.||.:.:  .::.:|.|:.:..... |..|.||    |
Mouse    96 EQEAARTAKIK--------EGELQRLQATLNVLRDGAADKVKTALLADAREE-ARRTFDG----E 147

  Fly   248 IQRLTNEIAVLKEANRNKEEKTQIMGQADRLKAADMRQLKNAYENRLTHIQKSAKIEITRLLEEI 312
            .|||..||..||.|.:..||......|||:.||||:|....|:::.:..|::..:.:|.||::||
Mouse   148 RQRLQQEILELKAARKQAEEALSNCMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEI 212

  Fly   313 KTKERNIGQLRKDL--LALQSPKKLKQNEAKVPATTKPKTNPNETSQKPKKPTTKAAGETKAKTE 375
            |.|||.|..|.|:|  ...|:.:.|.|.||......:.|......| .||:......|: .|:..
Mouse   213 KGKERVILALEKELGVQTGQTQRLLLQKEALDEQLVQVKEAERHHS-SPKRELPPGIGD-MAELM 275

  Fly   376 PDTDTDISEQNPIRQAQVTPEITQLKNIELINNTKNAHKSALEMRTTMKSSQPNGLDDAPTRMRA 440
            ...|..:.|::..|        .|||..||     |:....||.|.|:.:.:.|           
Mouse   276 GGQDQHMDERDVRR--------FQLKIAEL-----NSVIRKLEDRNTLLADERN----------- 316

  Fly   441 PDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTDSALSSAPPSISPQPPSSGSDSGVIWQ 505
                       .|:..:..:.....|.|.|:|..|...:..|.|                     
Mouse   317 -----------ELLKRSRETEVQLKPLVEKNKRMNKKNEELLHS--------------------- 349

  Fly   506 TLQDLDKLQKEAEMYQKENERLQTEVQLMKQELDAAEKAAISRAKKQAQIGELMQRIKELEEMQS 570
                :.:::::.:...:||..       ||::|.|  :|::.|                    .:
Mouse   350 ----IQRMEEKLKSLTRENVE-------MKEKLSA--QASLKR--------------------HT 381

  Fly   571 SLEDEASELREQNELLEFRILELEDDSDKMESTCEGHCQSLQDLLEQSAQRLEDRDKRCLQQLLQ 635
            ||.| .|..|::.|:...|:..||.             |.:.|.|....:||. |.||...:.|:
Mouse   382 SLND-LSLTRDEQEIEFLRLQVLEQ-------------QHVIDDLSLERERLL-RSKRHRGKSLK 431

  Fly   636 CVQQLDLDTMMPGDQNRTETPKRHNSTHSHSHSHSHSQSHNHRIVATVQPYSNCATPTAPPTPSK 700
            ..::..::|....|:...:             |.:.|::          .|:...|...|.||.:
Mouse   432 PPKKHVVETFFGFDEESVD-------------SETLSET----------SYNTDRTDRTPATPEE 473

  Fly   701 RHCNQVSSWQSSSLSESGVFVECDLLSNPNPIGHPHLQFYQERLEQLEGKLLIYESSGETQARHL 765
                        .|.|:....|.||                                        
Mouse   474 ------------DLDETTTREEADL---------------------------------------- 486

  Fly   766 AQRLQRELQLEKDLKELADRVELLIEQNAQLEEAKCEFEEAENDTRLHLQ----RNEVELEILRQ 826
                 |..||.::.:.|.....||.||.....:|     |.|..||..||    |.:.::|.|.:
Mouse   487 -----RFCQLTREYQALQRAYALLQEQVGGTLDA-----EREARTREQLQADLLRCQAKIEDLEK 541

  Fly   827 RNVELEFGKEALGAKYQDC----RAEVLI-LREDLAAAETQLEHLQAERKQARKELQDLRRSLPL 886
            ..||          |.||.    ..:||: ..:||.   .::..|:.|..|.:.|:||.:.... 
Mouse   542 LLVE----------KGQDAAWVEEKQVLMRTNQDLL---EKIYRLEMEENQLKSEMQDAKDQNE- 592

  Fly   887 LLIFRLLSLAKMGNEESSPGGSPRL-------SSGYTSSIHQDRDFSAKIQTTEFDLGQAGFTDS 944
            ||.||:|.|.:  .|..||..:.::       ||......||:......|.....:|...|  |:
Mouse   593 LLEFRVLELEE--RERRSPAFNLQITTFPENNSSALQLFCHQEGVKGVNISELMKNLDILG--DN 653

  Fly   945 GEEREIVYLKEEVKSLRS----QLKELNARHYEAMETA-DSHWVDLEQQYKEREEAQQAKEASLK 1004
            |..|.    :|:|..:::    .|.|...:..|..|.| ....:|||   ||:::..:.| ..|:
Mouse   654 GNLRN----EEQVAVIQAGTVLALCEKWLKQIEGTEAALTQKMMDLE---KEKDQFSRQK-GYLE 710

  Fly  1005 QKIAQLQDCLREDSRAATEKIQQLEEGELSLKSCLVRMTKEHRDLLTENRTLQCSLESLMAKMEK 1069
            |::...::.|.:......||||.||                                        
Mouse   711 QELDYRKEALDQAYLVGPEKIQDLE---------------------------------------- 735

  Fly  1070 EAEHKMPLTEALENE--RRKTQAL----MDDLIFA-KKVQQNTEDQLRQETDALRTQIFNIKKDY 1127
                 ..|..||:.|  ||.::||    .:||..| :||::    ||.:::....:||...:.:.
Mouse   736 -----ATLYNALQQEPGRRASEALSASQREDLQAAVEKVRR----QLLRQSREFDSQILRERMEL 791

  Fly  1128 LHIEVTNGELKEEVGTLENKIRQMENQMRDSEERARCLEDEL 1169
            |.      :.::::..:|.|:.....|:::.||:...|..||
Mouse   792 LQ------QAQQKIREMEGKLELQRRQLKELEEKDPLLNLEL 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1ANP_001189195.2 JAKMIP_CC3 <156..282 CDD:292653 39/130 (30%)
JAKMIP_CC3 <516..595 CDD:292653 16/78 (21%)
Jakmip1XP_011239086.1 SMC_prok_A 56..>363 CDD:274009 92/403 (23%)
JAKMIP_CC3 415..612 CDD:374316 62/298 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002005
OrthoInspector 1 1.000 - - oto94677
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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