DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1A and Jakmip3

DIOPT Version :9

Sequence 1:NP_001189195.2 Gene:Pif1A / 8674049 FlyBaseID:FBgn0261015 Length:1264 Species:Drosophila melanogaster
Sequence 2:XP_036009374.1 Gene:Jakmip3 / 74004 MGIID:1921254 Length:847 Species:Mus musculus


Alignment Length:986 Identity:199/986 - (20%)
Similarity:376/986 - (38%) Gaps:338/986 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 NQEKRTRIEGIQLHCRGKLRPKETQSFEAEKGPSAGSQKQLGKAEKDRERPVIIGGVTTTNVIAA 145
            |:|.|.::..||:    :|:.::::..:.|:..|. ..||:.:.|: |:..|::           
Mouse    25 NEELRAKLTDIQI----ELQQEKSKVSKVEREKSQ-ELKQVREHEQ-RKHAVLV----------- 72

  Fly   146 PPQRIKRKLQENMDTIQKLNALTEQLRLEVNELKSSLITERGAVRALRAQNDADSRRWKSEVKKL 210
              ..:|.||.|  :.:::|.|:.|.| |..:|.:        .:|.::.:::.:.|     ::.|
Mouse    73 --TELKTKLHE--EKMKELQAVREAL-LRQHEAE--------LLRVIKIKDNENQR-----LQAL 119

  Fly   211 QHTL-----------------EMAKKSNGIKKAIESGPESSGAHVTADGLINYEIQRLTNEIAVL 258
            .:||                 |.|||...::|.                       ::..||:.|
Mouse   120 LNTLRDGAPDKVKTVLLCEAKEEAKKGFEVEKV-----------------------KMQQEISEL 161

  Fly   259 KEANRNKEEKTQIMGQADRLKAADMRQLKNAYENRLTHIQKSAKIEITRLLEEIKTKERNIGQLR 323
            |.|.:..||...::.|||::|||::|.:.:.::..:|.|:|..:.||.||:|||:.|:|.:..|.
Mouse   162 KGAKKQVEEALTMVIQADKIKAAEIRSVYHLHQEEITRIKKECEREIRRLMEEIRFKDRAVFVLE 226

  Fly   324 KDL---------LALQSPKKLKQ-NEAKVPATTKPKTNPNETSQKPKKPTTKAAGETKAKT-EPD 377
            ::|         |.||.....:| ::||     :.:.:|.  |.:.:.|....||:....: .|:
Mouse   227 RELGVQAGHAQRLQLQKEALDEQLSQAK-----EAERHPG--SPRRELPYASGAGDASDHSGSPE 284

  Fly   378 TDTD----------ISEQNPI------RQAQVTPEITQLKNIELINNTKNAHKSALE--MRTTMK 424
            ...|          |:|.:.|      |.|.::.|..:|  ::.:...::.:|..|:  .|.|.|
Mouse   285 QQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNEL--LKRLREAESQYKPLLDKNKRLTRK 347

  Fly   425 SS-------------------------------QPNGLDDAP----------------TRMRAPD 442
            :.                               :|:.|:|..                .:....|
Mouse   348 NEDLSHTLRRIESKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREIDFLKLQIVEQQNLID 412

  Fly   443 EMRATTWMTTLVGS-----NCHSHSHSHPAVAK-SKDP-------NSDTDSALSSAPPSIS---- 490
            |:..|......|.|     ....:......:|| .|.|       ..|.:::|.|...|||    
Mouse   413 ELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKKPVVVETFFGYDEEASLESDGSSISYQTD 477

  Fly   491 -----PQPPSSGSDSGVI--------------WQTLQDLDKLQKE-------AEMYQKENERLQT 529
                 |..|....:.|:.              :|.||....|.:|       ||...|..|:||.
Mouse   478 RTDQTPCTPEDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQA 542

  Fly   530 EVQLMKQELDAAEKAAISRA-------KKQA---QIGELMQRIKELEEMQSSLEDEASELREQNE 584
            |:|..:..::..|||...:.       :|||   :..||:::||::|..::.|:.|..:.::|||
Mouse   543 EIQRAQTRVEDLEKALAEQGQDMKWIEEKQALYRRNQELVEKIKQMETEEARLKHEVQDAKDQNE 607

  Fly   585 LLEFRILELE-----------------DDSDKMESTCEGHCQSLQDLLEQSAQRLEDRDKRCLQQ 632
            ||||||||||                 |....::..||  .:.:.|:|                 
Mouse   608 LLEFRILELEERERKSPAINFHHTPFVDGKSPLQVYCE--AEGVTDIL----------------- 653

  Fly   633 LLQCVQQLDLDTMMPGDQNRTETPKRHNSTHSHSHSHSHSQSHNHRIVATVQPYSNCATPTAPPT 697
            :.:.:::||:    .||                   ::.|...|...|..:|..:..       |
Mouse   654 VTELMKKLDI----LGD-------------------NAVSNLTNEEQVVVIQARTVL-------T 688

  Fly   698 PSKRHCNQVSSWQSSSLSESGVFVEC--DLLSNPNPIGHPHLQFYQERLEQ-----LEGKLLIYE 755
            .:::...::...: |:|....|.:|.  :|.|.........|.:.::.|:|     ||.:.::|:
Mouse   689 LAEKWLQRIEETE-SALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQAHKHILELEAMLYD 752

  Fly   756 SSGETQARHLAQRLQRELQLEKDLKELADRVELLIEQNAQLEEAKCEFEEAENDTRLHLQRNEVE 820
            :..:.....:|:.|..|.:         :::::.:||    .:.:...|..|.|.::..:|.|: 
Mouse   753 ALQQEAGAKVAELLSEEER---------EKLKVAVEQ----WKRQVMSELRERDAQILRERMEL- 803

  Fly   821 LEILRQRNVELEFGKEALGAKYQDCRAEVLILREDLAAAETQLEHLQAERKQARKELQDLRRSLP 885
            |:|.:||..|||                               |.::.:::|. |||::     .
Mouse   804 LQIAQQRIKELE-------------------------------ERIETQKRQI-KELEE-----K 831

  Fly   886 LLLIFRLLSLA 896
            .|.:|...|||
Mouse   832 FLFLFLFFSLA 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1ANP_001189195.2 JAKMIP_CC3 <156..282 CDD:292653 29/142 (20%)
JAKMIP_CC3 <516..595 CDD:292653 35/112 (31%)
Jakmip3XP_036009374.1 SMC_prok_B 8..825 CDD:274008 190/961 (20%)
JAKMIP_CC3 430..627 CDD:406442 52/196 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002005
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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