DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1A and jakmip3

DIOPT Version :10

Sequence 1:NP_001189195.2 Gene:Pif1A / 8674049 FlyBaseID:FBgn0261015 Length:1264 Species:Drosophila melanogaster
Sequence 2:XP_031762293.1 Gene:jakmip3 / 100496365 XenbaseID:XB-GENE-982110 Length:842 Species:Xenopus tropicalis


Alignment Length:951 Identity:203/951 - (21%)
Similarity:358/951 - (37%) Gaps:289/951 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KGPSAGSQKQLGKAEKDRERPVIIGGVTTTNVIAAPPQRIKRKLQENMDTIQKL----NALTEQL 171
            ||..|.:...|..|.:|               :.|....|:.:||:....:.||    |...:|:
 Frog    11 KGDKADASASLQAANED---------------LRAKLTDIQIELQQEKSKVSKLEREKNQEIKQI 60

  Fly   172 R--------LEVNELKSSLITERGAVRALRAQNDADSRRWKSEVKKLQHTLEMAKKSN----GIK 224
            |        :.:.|||:.|..|:  ::.|:|..:|..|:.:||   |...:::....|    .|.
 Frog    61 REHEQHKNIVLITELKAKLHEEK--MKELQAVREALLRQHESE---LFRVIKIKDNDNQRLQAIV 120

  Fly   225 KAIESG-PES------SGAHVTADGLINYEIQRLTNEIAVLKEANRNKEEKTQIMGQADRLKAAD 282
            .|:..| ||.      |.|...|..:.::|..::..||..||.|.|..||...::.|||::|||:
 Frog   121 NALRDGAPEKVKTVLFSEAKEEAKKVFDFEKIKMQQEIFELKGAKRQMEEALTVVMQADKMKAAE 185

  Fly   283 MRQLKNAYENRLTHIQKSAKIEITRLLEEIKTKERNIGQLRKDLLALQS--PKKLK-QNEAKVPA 344
            :|.:.:.::..::.|::..:.||.||::|||.|:|.:..|.|: |.:||  .::|: |.||....
 Frog   186 IRSIYHLHQEEISKIKRECEREIRRLMDEIKLKDRAVNLLEKE-LGVQSGHAQRLQLQKEALDEQ 249

  Fly   345 TTKPKTNPNETSQKPKK--PTTKAAGETKAKT-EPDTDTD----------ISEQNPI------RQ 390
            ..:.|.:....| .||:  |....||||...: .|:...|          |:|.:.|      |.
 Frog   250 LIQFKESDRHLS-SPKRELPNASGAGETSDHSGSPEQQLDEKDARRFQLKIAELSSIIRKLEDRN 313

  Fly   391 AQVTPEITQL-----------------------KNIELI-------NNTKNAHKSALEMRTTMKS 425
            |.::.|..:|                       ||.|:.       |..|...:..:|||.....
 Frog   314 ALLSEERNELLKRLREAESQYKPILDKNKRLSRKNEEISHLLRRMENKLKFLTQENIEMRQKAGI 378

  Fly   426 SQPNGLDDAP----------TRMRAP------DEMRATTWMTTLVGSNCHSHS-----HSHPAVA 469
            .:|:.|:|..          .|::..      ||:..|......|.|......     .....:|
 Frog   379 RRPSSLNDLDQSREEREIDFLRLQLNEQQLFIDELCKTLETAGYVKSVLDREKLLRFRKQRKKMA 443

  Fly   470 KSKDP------NSDTDSALSSAPPSIS---------PQPPSSGSDSGVI--------------WQ 505
            |...|      ..|.:::|.|...|||         |..|....:.|:.              :|
 Frog   444 KLPKPVVETFFGYDEEASLDSDGSSISYHTDRTDRTPCTPDEDVEEGMAKEETELRFRQLTMEYQ 508

  Fly   506 TLQDLDKLQKE-------AEMYQKENERLQTEVQLMKQELDAAEKAAISRAKKQAQI-------- 555
            .||....|.:|       ||...|..|:||.::...::.::..|||...:.:....|        
 Frog   509 ALQRAYALLQEQVGGTLDAEREVKTREQLQADIYQYQRTIEDLEKAMSEQGQDMKWIEEKQGLYR 573

  Fly   556 --GELMQRIKELEEMQSSLEDEASELREQNELLEFRILELEDDSDKM-------------ESTCE 605
              .||:.:||::|..::..:.:..::::|||||||||||||:...:.             :|..:
 Frog   574 RNQELVDKIKQMETDEAKFKHDIQDVKDQNELLEFRILELEERERRSPGITFHHIPFTEGKSPLQ 638

  Fly   606 GHCQS--LQDLLEQSAQRLEDRDKRCLQQLLQCVQQLDLDTMMPGDQNRTETPKRHNSTHSHSHS 668
            .:|::  :.|::                 :.:.:::||:   :..:.|.|               
 Frog   639 VYCEAEGVTDII-----------------VSELMKKLDI---LGDNANLT--------------- 668

  Fly   669 HSHSQSHNHRIVATVQPYSNCATPTAPPTPSKRHCNQVSSW-QSSSLSESGVFV-------ECDL 725
                   |...|..:|              ::...|....| |...::||.:..       |.|.
 Frog   669 -------NDEQVIVIQ--------------ARTVLNLAEKWLQQIEVTESALQQKMVDLENEKDQ 712

  Fly   726 LSNPNPIGHPHLQFYQERLEQLEGKLLIYESSGETQARHLAQRLQRELQLEKDLKELADRVELLI 790
            .:.........|.|.::.|:|...::|..|:.       |...||:|:.        |....||.
 Frog   713 FTKQKGYLDDELDFRKQSLDQAHKQILELEAM-------LYDALQQEVG--------AKMAHLLS 762

  Fly   791 EQNAQLEEAKCEFEEAENDTRLHLQRNEVELEILRQRNVELEFGKEALGAKYQDCRAEVLILRED 855
            |:  :.||.||..|:.:....:.|:  |.:.:|||:|                         .|.
 Frog   763 EE--EREELKCAVEQWKRQVMIELR--ERDAQILRER-------------------------MEV 798

  Fly   856 LAAAETQLEHLQAERKQARKELQDLRRSLPLLLIFRLLSLA 896
            :..|:.:::.|:...:..:::|::|...  .|.:|...|||
 Frog   799 IQHAQQKIKELEERIEFQKRQLKELEEK--FLFLFLFFSLA 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1ANP_001189195.2 JAKMIP_CC3 <516..595 CDD:464986 28/95 (29%)
Smc <741..>1156 CDD:440809 33/156 (21%)
jakmip3XP_031762293.1 SMC_prok_B 27..819 CDD:274008 191/913 (21%)
JAKMIP_CC3 428..623 CDD:464986 45/194 (23%)

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