DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pif1A and jakmip3

DIOPT Version :9

Sequence 1:NP_001189195.2 Gene:Pif1A / 8674049 FlyBaseID:FBgn0261015 Length:1264 Species:Drosophila melanogaster
Sequence 2:XP_031762293.1 Gene:jakmip3 / 100496365 XenbaseID:XB-GENE-982110 Length:842 Species:Xenopus tropicalis


Alignment Length:951 Identity:203/951 - (21%)
Similarity:358/951 - (37%) Gaps:289/951 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KGPSAGSQKQLGKAEKDRERPVIIGGVTTTNVIAAPPQRIKRKLQENMDTIQKL----NALTEQL 171
            ||..|.:...|..|.:|               :.|....|:.:||:....:.||    |...:|:
 Frog    11 KGDKADASASLQAANED---------------LRAKLTDIQIELQQEKSKVSKLEREKNQEIKQI 60

  Fly   172 R--------LEVNELKSSLITERGAVRALRAQNDADSRRWKSEVKKLQHTLEMAKKSN----GIK 224
            |        :.:.|||:.|..|:  ::.|:|..:|..|:.:||   |...:::....|    .|.
 Frog    61 REHEQHKNIVLITELKAKLHEEK--MKELQAVREALLRQHESE---LFRVIKIKDNDNQRLQAIV 120

  Fly   225 KAIESG-PES------SGAHVTADGLINYEIQRLTNEIAVLKEANRNKEEKTQIMGQADRLKAAD 282
            .|:..| ||.      |.|...|..:.::|..::..||..||.|.|..||...::.|||::|||:
 Frog   121 NALRDGAPEKVKTVLFSEAKEEAKKVFDFEKIKMQQEIFELKGAKRQMEEALTVVMQADKMKAAE 185

  Fly   283 MRQLKNAYENRLTHIQKSAKIEITRLLEEIKTKERNIGQLRKDLLALQS--PKKLK-QNEAKVPA 344
            :|.:.:.::..::.|::..:.||.||::|||.|:|.:..|.|: |.:||  .::|: |.||....
 Frog   186 IRSIYHLHQEEISKIKRECEREIRRLMDEIKLKDRAVNLLEKE-LGVQSGHAQRLQLQKEALDEQ 249

  Fly   345 TTKPKTNPNETSQKPKK--PTTKAAGETKAKT-EPDTDTD----------ISEQNPI------RQ 390
            ..:.|.:....| .||:  |....||||...: .|:...|          |:|.:.|      |.
 Frog   250 LIQFKESDRHLS-SPKRELPNASGAGETSDHSGSPEQQLDEKDARRFQLKIAELSSIIRKLEDRN 313

  Fly   391 AQVTPEITQL-----------------------KNIELI-------NNTKNAHKSALEMRTTMKS 425
            |.::.|..:|                       ||.|:.       |..|...:..:|||.....
 Frog   314 ALLSEERNELLKRLREAESQYKPILDKNKRLSRKNEEISHLLRRMENKLKFLTQENIEMRQKAGI 378

  Fly   426 SQPNGLDDAP----------TRMRAP------DEMRATTWMTTLVGSNCHSHS-----HSHPAVA 469
            .:|:.|:|..          .|::..      ||:..|......|.|......     .....:|
 Frog   379 RRPSSLNDLDQSREEREIDFLRLQLNEQQLFIDELCKTLETAGYVKSVLDREKLLRFRKQRKKMA 443

  Fly   470 KSKDP------NSDTDSALSSAPPSIS---------PQPPSSGSDSGVI--------------WQ 505
            |...|      ..|.:::|.|...|||         |..|....:.|:.              :|
 Frog   444 KLPKPVVETFFGYDEEASLDSDGSSISYHTDRTDRTPCTPDEDVEEGMAKEETELRFRQLTMEYQ 508

  Fly   506 TLQDLDKLQKE-------AEMYQKENERLQTEVQLMKQELDAAEKAAISRAKKQAQI-------- 555
            .||....|.:|       ||...|..|:||.::...::.::..|||...:.:....|        
 Frog   509 ALQRAYALLQEQVGGTLDAEREVKTREQLQADIYQYQRTIEDLEKAMSEQGQDMKWIEEKQGLYR 573

  Fly   556 --GELMQRIKELEEMQSSLEDEASELREQNELLEFRILELEDDSDKM-------------ESTCE 605
              .||:.:||::|..::..:.:..::::|||||||||||||:...:.             :|..:
 Frog   574 RNQELVDKIKQMETDEAKFKHDIQDVKDQNELLEFRILELEERERRSPGITFHHIPFTEGKSPLQ 638

  Fly   606 GHCQS--LQDLLEQSAQRLEDRDKRCLQQLLQCVQQLDLDTMMPGDQNRTETPKRHNSTHSHSHS 668
            .:|::  :.|::                 :.:.:::||:   :..:.|.|               
 Frog   639 VYCEAEGVTDII-----------------VSELMKKLDI---LGDNANLT--------------- 668

  Fly   669 HSHSQSHNHRIVATVQPYSNCATPTAPPTPSKRHCNQVSSW-QSSSLSESGVFV-------ECDL 725
                   |...|..:|              ::...|....| |...::||.:..       |.|.
 Frog   669 -------NDEQVIVIQ--------------ARTVLNLAEKWLQQIEVTESALQQKMVDLENEKDQ 712

  Fly   726 LSNPNPIGHPHLQFYQERLEQLEGKLLIYESSGETQARHLAQRLQRELQLEKDLKELADRVELLI 790
            .:.........|.|.::.|:|...::|..|:.       |...||:|:.        |....||.
 Frog   713 FTKQKGYLDDELDFRKQSLDQAHKQILELEAM-------LYDALQQEVG--------AKMAHLLS 762

  Fly   791 EQNAQLEEAKCEFEEAENDTRLHLQRNEVELEILRQRNVELEFGKEALGAKYQDCRAEVLILRED 855
            |:  :.||.||..|:.:....:.|:  |.:.:|||:|                         .|.
 Frog   763 EE--EREELKCAVEQWKRQVMIELR--ERDAQILRER-------------------------MEV 798

  Fly   856 LAAAETQLEHLQAERKQARKELQDLRRSLPLLLIFRLLSLA 896
            :..|:.:::.|:...:..:::|::|...  .|.:|...|||
 Frog   799 IQHAQQKIKELEERIEFQKRQLKELEEK--FLFLFLFFSLA 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1ANP_001189195.2 JAKMIP_CC3 <156..282 CDD:292653 40/148 (27%)
JAKMIP_CC3 <516..595 CDD:292653 28/95 (29%)
jakmip3XP_031762293.1 Smc 8..>366 CDD:224117 94/376 (25%)
JAKMIP_CC3 429..623 CDD:406442 45/193 (23%)
Smc 524..>814 CDD:224117 73/389 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002005
OrthoInspector 1 1.000 - - oto104869
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.