DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1A and jakmip1

DIOPT Version :9

Sequence 1:NP_001189195.2 Gene:Pif1A / 8674049 FlyBaseID:FBgn0261015 Length:1264 Species:Drosophila melanogaster
Sequence 2:XP_012811334.1 Gene:jakmip1 / 100145282 XenbaseID:XB-GENE-991323 Length:839 Species:Xenopus tropicalis


Alignment Length:1159 Identity:235/1159 - (20%)
Similarity:426/1159 - (36%) Gaps:376/1159 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 MAKNKLKRKKKLSSSLTSVGDTVNQEKRTRIEGIQLHCRGKLRPKETQSFEAEKGPSAGSQKQLG 122
            |:|....|.:|....:.:. ...|:|.|.::..||:            .::.||          .
 Frog     1 MSKKNRSRGEKCDIEMEAF-QAANEELRAKLTQIQI------------EYQQEK----------N 42

  Fly   123 KAEKDRERPVIIGGVTTTNVIAAPPQRIKRKLQENMDT--IQKLNA-LTEQLRLEVNELKSSLIT 184
            |..|.||:   |..|           |::|:.:::..|  |.:|.| |.|:...||..::.|||.
 Frog    43 KVGKLREK---IQDV-----------RLEREQEQHRHTAYISELKAKLHEEKMKEVQSVRESLIR 93

  Fly   185 --ERGAVRALRAQNDADSRRWKSEVKKLQHTLEMAK--KSNGIKKAI--ESGPESSGAHVTADGL 243
              |:...|.::.::        |||::||.||.:.:  .::.:|.|:  |:..|:..|       
 Frog    94 QHEQDVARVVKIKD--------SEVQRLQCTLNVLRDGAADKVKTALLNEAREEARKA------- 143

  Fly   244 INYEIQRLTNEIAVLKEANRNKEEKTQIMGQADRLKAADMRQLKNAYENRLTHIQKSAKIEITRL 308
            .:.|..:|..||..||...:..||....:.|||::||.|:|.....::..:..|::.::.:|.||
 Frog   144 FDNERTKLQQEILALKTEKKQIEESLNNVMQADKMKATDLRIAYQTHQEEIARIKRESEKDIRRL 208

  Fly   309 LEEIKTKERNIGQLRKD--LLALQSPKKLKQNEAKVPATTKPKTNPNETSQKPKK---PTTKAAG 368
            :||||.|||.|..|.|:  :.|..:.|.|.|.||......:.| ........|||   |......
 Frog   209 MEEIKAKERVILALEKEVGVQAGHTQKLLLQKEALDEQLVQAK-EAERYHSSPKKELPPGVCDIS 272

  Fly   369 ETKAKTEPDTDTDISEQNPIRQAQVTPEITQLKNIELINNTKNAHKSALEMRTTMKSSQPNGLDD 433
            |.....||..|     ...:|:       .|||..||     :|....||.|.|:.|.:.|.|  
 Frog   273 ELLGNGEPHVD-----DRDLRR-------FQLKIAEL-----HAVIRKLEDRNTLLSDERNEL-- 318

  Fly   434 APTRMRAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTDSALSSAPPSISPQPPSSGS 498
             ..|:|                   .:.|...|.|.|:|..:...:                   
 Frog   319 -LKRVR-------------------ETESQLKPLVEKNKRMSKKNE------------------- 344

  Fly   499 DSGVIWQTLQDLDKLQKEAEMYQKENERLQTEVQLMKQELDAAEKAAISRAKKQAQIGELMQRIK 563
                  .|||.:.:::::.:...:||..:                    :.|..|||.  ::|..
 Frog   345 ------DTLQTIQRMEEKIKSLSRENAEM--------------------KEKTSAQIS--LKRHA 381

  Fly   564 ELEEMQSSLEDEASELREQNELLEFRILELEDDSDKMESTCEGHCQSLQDLLEQSAQRLEDRDKR 628
            .|:::.::.|.|.       |.|..:::|.:              |.:.|:..:..:.|  |.||
 Frog   382 SLDDLSTAQEQEI-------EFLRLQVMEQQ--------------QVIDDITVEKERML--RCKR 423

  Fly   629 CLQQLLQCVQQLDLDTMMPGDQNRTETPKRHNSTHSHSHSHSHSQSHNHRIVATVQPYSNCATPT 693
            ..::.|:..::..::|....|:...::.                       .:::..|:...|..
 Frog   424 PKRKSLKPPRRHVVETFFGFDEESVDSE-----------------------TSSITSYTTDKTDR 465

  Fly   694 APPTPSKRHCNQVSSWQSSSLSESGVFVECDLLSNPNPIGHPHLQFYQERLEQLEGKLLIYESSG 758
            .|.||                       |.|:..| .|.....|:|.|...|.            
 Frog   466 TPATP-----------------------EEDIEDN-TPKEESDLRFRQLTREY------------ 494

  Fly   759 ETQARHLAQRLQRELQLEKDLKELADRVELLIEQNAQLEEAKCEFEEAENDTRLHLQRNEVELEI 823
                    |.|||...|                    |:|......:||.:.|   .|.:::.::
 Frog   495 --------QALQRAYAL--------------------LQEQVGGTLDAEREAR---TREQLQTDL 528

  Fly   824 LRQRNVELEFGKEALGAKYQDCR-----AEVLILREDLAAAETQLEHLQAERKQARKELQDLRRS 883
            ||.: .::|..:.:|..:.||.|     .::|...::|.   .:|...:.|.||.:.|:||.|..
 Frog   529 LRYQ-AKIEDLENSLSERGQDSRWVEEKQQLLKSNQNLL---EKLFRFELEEKQLKNEIQDARDQ 589

  Fly   884 LPLLLIFRLLSLAKMGNEESSPGGSPRLSSGYTSSIHQDRDFSAKIQTTEFDLGQAGFTD-SGEE 947
            .. ||.||:|.|.:  .|..||.                           |:|..|.|.: :|..
 Frog   590 NE-LLEFRVLELEE--RERRSPA---------------------------FNLHIANFPENNGSA 624

  Fly   948 REIVYLKEEVKSLRSQLKELNARHYEAMETADSHWVDLEQQYKEREEAQQAKEASLKQKIAQLQD 1012
            .::...:|.:|.                       ||:.:..|:.:..........::::|.:| 
 Frog   625 LQLFCQQEGIKD-----------------------VDISELMKKLDILGDNGNLRNEEQVAVIQ- 665

  Fly  1013 CLREDSRAAT-----EK-IQQLEEGELSLKSCLVRMTKEHRDLLTENRTLQCSLESLMAKMEKEA 1071
                   |.|     || ::|:|..|.:|...::.:..| ::|.::.:          ..:|:|.
 Frog   666 -------AGTVLSLCEKWLKQIEVTEAALTQKMIDLENE-KELFSKQK----------GYLEEEL 712

  Fly  1072 EHKMPLTEALENERRKTQALMDDLIFAKK----------VQQNTEDQLRQETDALRTQIFNIKKD 1126
            :::   .:||:....|.|.|...|..|.:          :.:|..:.||...:.||.||....::
 Frog   713 DYR---KQALDQAHMKIQELEATLYNALQQEPGRRVSECLNENQREDLRAAVEKLRRQILRQSRE 774

  Fly  1127 Y----LH--IEVTNGELKEEVGTLENKIRQMENQMRDSEER-ARC-LEDELRTK 1172
            :    ||  :|:.. :.::.:..||:||...:.|:::.||: :.| |:|:.:.:
 Frog   775 FDSQILHERMELLQ-QAQQRIRELEDKIDFQKRQLKELEEKHSFCGLDDQFQQR 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1ANP_001189195.2 JAKMIP_CC3 <156..282 CDD:292653 38/134 (28%)
JAKMIP_CC3 <516..595 CDD:292653 13/78 (17%)
jakmip1XP_012811334.1 Smc 23..814 CDD:224117 227/1121 (20%)
JAKMIP_CC3 415..611 CDD:406442 57/321 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002005
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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