DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr21 and Kirrel3

DIOPT Version :9

Sequence 1:NP_001163838.2 Gene:dpr21 / 8674044 FlyBaseID:FBgn0260995 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_038937320.1 Gene:Kirrel3 / 315546 RGDID:1311382 Length:869 Species:Rattus norvegicus


Alignment Length:291 Identity:73/291 - (25%)
Similarity:109/291 - (37%) Gaps:76/291 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VFLTFRIFL---------CILILKETCPQHFRENVTVTDLYLISENIVPMKRVLDRGPYFDTSAT 58
            :||.|.:|.         |.|:|.......|| .:....:|..|:.  |..:|:..|        
  Rat     9 LFLCFFLFSQELGLQRRGCCLVLGYMAKDKFR-RMNEGQVYSFSQQ--PQDQVVVSG-------- 62

  Fly    59 KNVTSLVGITGHLNCRIKNLGNKTVSWIRH-------RDLHLLTVSESTYTSDQRFTSIYNKQTG 116
            :.||.|..|..:         :..|.||:.       |||       |:|   .::..:.|..:|
  Rat    63 QPVTLLCAIPEY---------DGFVLWIKDGLALGVGRDL-------SSY---PQYLVVGNHLSG 108

  Fly   117 DWSLQIKFPQLRDSGIYECQ----VSTTPPVGYTMVFSVVEPITSILGGPEIYIDLGSTVNLTCV 177
            :..|:|...:|:|..:||||    ...:.|...|::....:||  |||||.|.:..|..:|||| 
  Rat   109 EHHLKILRAELQDDAVYECQAIQAAIRSRPARLTVLVPPDDPI--ILGGPVISLRAGDPLNLTC- 170

  Fly   178 IKHLPD--PPISVQWNHNNQEIN---YDSP--RGGVSVITEKGDITTSYLLIQRASIADSGQYTC 235
              |..:  |..|:.|....:.||   |...  |.|      |.:...|.|.|....:.:.....|
  Rat   171 --HADNAKPAASIIWLRKGEVINGATYSKTLLRDG------KRESIVSTLFISPGDVENGQSIVC 227

  Fly   236 LPSN-----ANSKSVNVHILKGDHPAAVQKS 261
            ..:|     ....||.:.|   .||..|..|
  Rat   228 RATNKAIPGGKETSVTIDI---QHPPLVNLS 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr21NP_001163838.2 Ig 71..149 CDD:299845 20/88 (23%)
IG_like 71..140 CDD:214653 18/79 (23%)
IG_like 162..249 CDD:214653 24/98 (24%)
IGc2 169..242 CDD:197706 20/84 (24%)
Kirrel3XP_038937320.1 IG_like 54..143 CDD:214653 26/115 (23%)
Ig strand A' 56..60 CDD:409353 1/3 (33%)
Ig strand B 64..71 CDD:409353 3/6 (50%)
Ig strand C 78..82 CDD:409353 2/3 (67%)
Ig strand C' 84..87 CDD:409353 0/2 (0%)
Ig strand D 97..101 CDD:409353 0/3 (0%)
Ig strand E 104..116 CDD:409353 4/11 (36%)
Ig strand G 132..143 CDD:409353 1/10 (10%)
IgI_2_KIRREL3-like 149..246 CDD:409416 30/107 (28%)
Ig strand B 166..170 CDD:409416 2/3 (67%)
Ig strand C 180..184 CDD:409416 1/3 (33%)
Ig strand E 210..214 CDD:409416 2/3 (67%)
Ig strand F 224..229 CDD:409416 1/4 (25%)
Ig strand G 239..242 CDD:409416 0/2 (0%)
Ig <267..334 CDD:416386
Ig strand B 267..274 CDD:409353
Ig strand C 279..286 CDD:409353
Ig strand C' 288..291 CDD:409353
Ig strand D 298..302 CDD:409353
Ig strand E 304..310 CDD:409353
Ig strand G 321..334 CDD:409353
Ig 335..416 CDD:416386
Ig strand A' 343..347 CDD:409353
Ig strand B 350..360 CDD:409353
Ig strand C 365..371 CDD:409353
Ig strand E 381..387 CDD:409353
IgI_5_KIRREL3 418..515 CDD:409479
Ig strand B 436..440 CDD:409479
Ig strand C 450..454 CDD:409479
Ig strand E 481..485 CDD:409479
Ig strand F 496..501 CDD:409479
Ig strand G 509..512 CDD:409479
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.