DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr21 and negr1

DIOPT Version :9

Sequence 1:NP_001163838.2 Gene:dpr21 / 8674044 FlyBaseID:FBgn0260995 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_031755650.1 Gene:negr1 / 100127726 XenbaseID:XB-GENE-987949 Length:388 Species:Xenopus tropicalis


Alignment Length:236 Identity:54/236 - (22%)
Similarity:90/236 - (38%) Gaps:51/236 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VTDLYLISENIVPMKRVLDRGPYFDTSATKNVTSLVGITGHLNCRIKNLGNKTVSWIRHRDLHLL 94
            :..|..:..:.:|..:.:|    |...|..|:....|.|..|.|.::. |....:|:....  ::
 Frog    22 ILSLCCLLPSCLPAGQSMD----FQWPAVDNLVVRQGETAMLRCFLEE-GASKGAWLNRSS--II 79

  Fly    95 TVSESTYTSDQRFTSIYNKQTGDWSLQIKFPQLRDSGIYECQVST-----TPPVGYTMVFSVVEP 154
            ......::.|.| .||......::||:|:...:.|.|.|.|.|.|     |..|..|:..|    
 Frog    80 FAGGDKWSVDPR-VSIATSSKQEYSLRIQKVDVSDDGPYTCSVQTEHSPRTLQVHLTVHVS---- 139

  Fly   155 ITSILGGPEIY-------IDLGSTVNLTCVIKHLPDPPISVQWNHNNQEINYDSPRGGVSVITEK 212
                   |:||       ::.|:.|:|.|:....|:|  |:.|.|    |:..:.:.|       
 Frog   140 -------PKIYDISSDMTVNEGTNVSLICLATGKPEP--SISWRH----ISPSAKQFG------- 184

  Fly   213 GDITTSYLLIQRASIADSGQYTCLPSNANS----KSVNVHI 249
               :..||.|...:...:|.|.|...|..|    |.|.|.:
 Frog   185 ---SGQYLDIYGITRDQAGDYECSAENDVSFPDVKKVKVTV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr21NP_001163838.2 Ig 71..149 CDD:299845 20/82 (24%)
IG_like 71..140 CDD:214653 17/73 (23%)
IG_like 162..249 CDD:214653 25/97 (26%)
IGc2 169..242 CDD:197706 18/72 (25%)
negr1XP_031755650.1 Ig 44..136 CDD:416386 23/95 (24%)
FR1 44..62 CDD:409353 5/17 (29%)
Ig strand A' 47..53 CDD:409353 1/5 (20%)
Ig strand B 55..63 CDD:409353 3/7 (43%)
CDR1 63..68 CDD:409353 1/5 (20%)
FR2 69..75 CDD:409353 1/5 (20%)
Ig strand C 69..74 CDD:409353 1/4 (25%)
CDR2 76..87 CDD:409353 0/12 (0%)
Ig strand C' 78..82 CDD:409353 0/3 (0%)
Ig strand C' 84..87 CDD:409353 0/2 (0%)
FR3 88..122 CDD:409353 11/34 (32%)
Ig strand D 91..98 CDD:409353 3/7 (43%)
Ig strand E 101..107 CDD:409353 2/5 (40%)
Ig strand F 114..122 CDD:409353 3/7 (43%)
CDR3 123..127 CDD:409353 1/3 (33%)
Ig strand G 127..136 CDD:409353 2/8 (25%)
FR4 129..136 CDD:409353 2/6 (33%)
Ig_3 140..208 CDD:404760 20/83 (24%)
Ig strand A' 146..151 CDD:409353 0/4 (0%)
Ig strand B 157..164 CDD:409353 3/6 (50%)
Ig strand C 170..175 CDD:409353 2/4 (50%)
Ig strand C' 177..179 CDD:409353 0/1 (0%)
Ig strand E 187..193 CDD:409353 3/5 (60%)
Ig strand F 200..207 CDD:409353 3/6 (50%)
Ig strand G 214..222 CDD:409353 3/7 (43%)
Ig_3 226..302 CDD:404760
putative Ig strand A 226..232 CDD:409353
Ig strand B 242..246 CDD:409353
Ig strand C 255..259 CDD:409353
Ig strand E 281..285 CDD:409353
Ig strand F 295..300 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11916
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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