DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr21 and lsamp

DIOPT Version :9

Sequence 1:NP_001163838.2 Gene:dpr21 / 8674044 FlyBaseID:FBgn0260995 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:213 Identity:54/213 - (25%)
Similarity:100/213 - (46%) Gaps:28/213 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 ATKNVTSLVGITGHLNCRIKNLGNKTVSWIRHRDLHLLTVSESTYTSDQRFTSIYNKQTGDWSLQ 121
            :|.|:|...|.|..|.|.:::..:: |:|:....  ::...:..::.|.| ..:..:...::||:
 Frog    37 STDNITVRQGDTAILRCFVEDRSSR-VAWLNRSG--IIFAGDDKWSLDPR-VELEKRSLLEYSLR 97

  Fly   122 IKFPQLRDSGIYECQVSTTPPVGYTMVFSVVE---PITSILGGPEIYIDLGSTVNLTCVIKHLPD 183
            |:...:.|.|.|.|.|.|......|.|:.:|:   .|::|  ..:|.::.||.|.|.|:....|:
 Frog    98 IQKVDVSDEGPYTCSVQTKQHTKTTQVYLIVQVPPKISNI--SADITVNEGSNVTLMCIAYGRPE 160

  Fly   184 PPISVQWNHNNQEINYDSPRGGVSVITE-KGDITTSYLLIQRASIADSGQYTCLPSN----ANSK 243
            |.|:  |.|.       :|..|.|...: :|:  ..:|.||..:...||:|.|..:|    |:.|
 Frog   161 PMIT--WRHL-------TPTAGTSPARDFEGE--EEFLEIQGITREQSGRYECKAANEVASADVK 214

  Fly   244 SVNVHILKGDHPAAVQKS 261
            .|.|.:   ::|..:.:|
 Frog   215 QVRVTV---NYPPIITES 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr21NP_001163838.2 Ig 71..149 CDD:299845 16/77 (21%)
IG_like 71..140 CDD:214653 14/68 (21%)
IG_like 162..249 CDD:214653 27/91 (30%)
IGc2 169..242 CDD:197706 23/77 (30%)
lsampXP_031751462.1 Ig 38..128 CDD:416386 22/93 (24%)
FR1 38..54 CDD:409353 6/15 (40%)
Ig strand A' 39..45 CDD:409353 2/5 (40%)
Ig strand B 47..55 CDD:409353 3/7 (43%)
CDR1 55..59 CDD:409353 0/3 (0%)
FR2 60..67 CDD:409353 2/7 (29%)
Ig strand C 60..66 CDD:409353 2/6 (33%)
CDR2 68..78 CDD:409353 0/11 (0%)
Ig strand C' 70..73 CDD:409353 0/2 (0%)
Ig strand C' 75..78 CDD:409353 0/2 (0%)
FR3 79..114 CDD:409353 9/35 (26%)
Ig strand D 83..90 CDD:409353 1/7 (14%)
Ig strand E 93..99 CDD:409353 2/5 (40%)
Ig strand F 106..114 CDD:409353 3/7 (43%)
CDR3 115..119 CDD:409353 1/3 (33%)
Ig strand G 119..128 CDD:409353 2/8 (25%)
FR4 121..128 CDD:409353 2/6 (33%)
Ig_3 131..206 CDD:404760 24/87 (28%)
Ig strand A' 138..143 CDD:409353 1/4 (25%)
Ig strand B 149..156 CDD:409353 3/6 (50%)
Ig strand C 162..167 CDD:409353 2/6 (33%)
Ig strand C' 173..175 CDD:409353 1/1 (100%)
Ig strand E 185..191 CDD:409353 2/5 (40%)
Ig strand F 198..205 CDD:409353 3/6 (50%)
Ig strand G 212..220 CDD:409353 3/7 (43%)
Ig_3 223..302 CDD:404760 2/7 (29%)
putative Ig strand A 224..230 CDD:409353 1/6 (17%)
Ig strand B 240..244 CDD:409353
Ig strand C 253..257 CDD:409353
Ig strand E 281..285 CDD:409353
Ig strand F 295..300 CDD:409353
Ig strand G 308..311 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11916
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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