DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc76C and npr1b

DIOPT Version :10

Sequence 1:NP_001163473.1 Gene:Gyc76C / 8674026 FlyBaseID:FBgn0266136 Length:1525 Species:Drosophila melanogaster
Sequence 2:XP_009290669.2 Gene:npr1b / 555911 ZFINID:ZDB-GENE-100805-4 Length:1070 Species:Danio rerio


Alignment Length:1094 Identity:397/1094 - (36%)
Similarity:592/1094 - (54%) Gaps:162/1094 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ISGALTMALDEVNKDPNLLP-----NVYLDLRWNDTKGDTVLATKAITEMICD-----GIATIFG 100
            :..||..|:..||.:|||||     :|:.    |....|.:.:......|..|     ......|
Zfish    68 VGPALDRAIARVNANPNLLPRHRVRHVFA----NSEDRDGICSESMAPLMAVDLKFEHNPWAFIG 128

  Fly   101 PEGPCYVEA---IVSQSRNIPMISY---KCAEYRASAIPTFARTEPPDTQVVKSLLALLRYYAWN 159
            | |..|..:   :.:....:|||:.   ..|..:.....:...|.|...::.:..|.|.|::.||
Zfish   129 P-GCDYTSSPVGLFTAHWGLPMITAGAPAVAFLQMEIYTSITNTGPTHKKLGEYALHLYRHFGWN 192

  Fly   160 KFSIL------------YEDVWSPVADLLKDQATKRNMTINHKQSFI-----------DNRVKCC 201
            :.|:|            |..:.....::.::..|..::.....:..:           |.||   
Zfish   193 QHSLLMFSDTKMGERACYFALEGLYTEMHEENITTMDLVFEENKGPVNYSELLHKIQGDGRV--- 254

  Fly   202 EQMLDCCRSGYWYQLVQNTMNRTRIYVFLGAANSLVDFMSSMETAGLFARGEYMVIFVDMMVYS- 265
              :..||....:.||:                   |.|    ..||| .:.||:..::|:..:| 
Zfish   255 --VFVCCSPDVFRQLI-------------------VHF----HKAGL-PKEEYVFFYIDIFGHSF 293

  Fly   266 -EREAEKYLRRVDQITFMSNCHSTENFNQMARSLLVVASTPPTKDYIQFTKQVQKYSSKPPFNLE 329
             .|.::.:.|......|     :.|.|..:.   ::....|..::|..|...: |..:|..||..
Zfish   294 RSRPSQPWARGDSDDVF-----AKEAFQSVK---ILTYLEPQNQEYKDFVTDL-KSDAKRMFNFT 349

  Fly   330 IPRLFVESNFSKFISIYAAYLYDSVKLYAWAVDKMLREETRVLTDDVIFEVASNGTRVIDTIIK- 393
            :.        ...::|.:...||.:.||..|:::.|.:.         .|..|.     :::.| 
Zfish   350 VD--------DSLMNIISGGFYDGLMLYCHALNESLSDS---------HERPSG-----ESVSKR 392

  Fly   394 --NRTYMSITGSKIKIDQYGDSEGNFSVLAYKPHKWNNSNNMPCNYHMVPVAYFHQGEEHPEYKL 456
              ||||..:|| .::||:.||.|.:|::       |:.::....::.:|.|   :.|.: .|..:
Zfish   393 MWNRTYYGVTG-LVQIDENGDRETDFAL-------WDMADINTGDFQIVAV---YNGTQ-KEMNI 445

  Fly   457 ING-SIDWPSGGEKPADEPMCGFANE--LCKKDDTHYTSTVA-----AVVLGVLLFCSGVITMSI 513
            :.| :|.|| ||:.|.|.|.|||.||  .|:      ..|:|     ::||.::|.....:|:.|
Zfish   446 LPGMAIQWP-GGKVPMDVPTCGFKNENPACR------ARTIAMHQMISIVLFLILIIIFTVTVFI 503

  Fly   514 YRKWKIELEIEGLLWKIDPNEIK-GYSGNEIVSSPSKVSL-MSAQSYGSRWTN----QFVTSTGR 572
            |||.|:|.|:...||:|..::|: .:....:.|:.||::| :...:|||..|.    |....||.
Zfish   504 YRKLKLEKELVAQLWRISWDDIQMSHLEKALRSTGSKLTLSLRGSNYGSLLTTDGNFQVFAKTGY 568

  Fly   573 LRGAVVRIKELKFPRKRDISREIMKEMRLLRELRHDNINSFIGASVEPTRILLVTDYCAKGSLYD 637
            .:|.:|.||.:. .|:.:::|:::.|::.:|:::::::..||||.::|..|.:||:||.:|||.:
Zfish   569 FKGNIVAIKYIN-RRRVELTRKVLFELKHMRDVQNEHLTRFIGACIDPPNICIVTEYCPRGSLQN 632

  Fly   638 IIENEDIKLDDLFIASLIHDLIKGMIYIHNSQLVYHGNLKSSNCVVTSRWMLQVTDFGLHELRQC 702
            |:||:.|.||.:|..|||.|::|||.::|||.:|.|||||||||||.:|::|::||:||..:|  
Zfish   633 ILENDSITLDWMFKYSLISDIVKGMAFLHNSVIVSHGNLKSSNCVVDNRFVLKITDYGLSSIR-- 695

  Fly   703 AENESIGEHQHYRNQLWRAPELLRNHIH---GSQKGDVYAFAIIMYEIFSRKGPF---GQINFEP 761
            .|:::...|.:|..:||.||||.|....   |:||||||:|.||:.|:..|:|.|   |.: ..|
Zfish   696 TESDTEDAHSYYARKLWLAPELSRMECFPPGGTQKGDVYSFGIILQEVALRRGVFYLEGDL-LSP 759

  Fly   762 KEIVDYVKKLPLKGEDPF-RPEVESIIEAESCPDYVLACIRDCWAEDPEERPEFSVIRNRLKKMR 825
            |||||.|    ..||.|: ||.:.....:|....    .::.||||:|.:|||||.|...|:|..
Zfish   760 KEIVDRV----ALGEWPYLRPSLNPQAHSEELGQ----LMQRCWAEEPSDRPEFSHISVLLRKQN 816

  Fly   826 GGKTKNIMDQMMEMMEKYANNLEDIVTERTRLLCEEKMKTEDLLHRMLPQSVAEKLTMGQGVEPV 890
            .....||:|.::..||:||||||::|.|||:...|||.|.|.||:::||.||||:|..|:.|:..
Zfish   817 REHRSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGETVQAE 881

  Fly   891 SYDLVTIYFSDIVGFTAMSAESTPLQVVNFLNDLYTVFDRIIRGYDVYKVETIGDAYMVVSGLPI 955
            ::|.||||||||||||::||||||||||..||||||.||.||..:|||||||||||||||||||:
Zfish   882 AFDSVTIYFSDIVGFTSLSAESTPLQVVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMVVSGLPV 946

  Fly   956 KNGDRHAGEIASMALELLHAVKQHRIAHRPNETLKLRIGMHTGPVVAGVVGLTMPRYCLFGDTVN 1020
            :||..|..|||.|:|.||.|||..:|.|||:|.||||||:|:|||.||||||.||||||||||||
Zfish   947 RNGKLHGREIARMSLALLEAVKTFKIRHRPDEQLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVN 1011

  Fly  1021 TASRMESNGEALKIHISNKCKLALDKLGGGYITEKRGLVNMKGKGDVVTWWLTG 1074
            |:||||||||.||||:|:..:..|.:. ..:..|.||.|.|||||.:.|:||.|
Zfish  1012 TSSRMESNGEPLKIHVSSATRAVLQEF-NCFQLELRGDVEMKGKGKMRTYWLLG 1064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc76CNP_001163473.1 PBP1_SAP_GC-like 26..445 CDD:380593 87/442 (20%)
PK_GC-A_B 543..827 CDD:270944 119/295 (40%)
HNOBA <833..881 CDD:462234 26/47 (55%)
CYCc 860..1052 CDD:214485 129/191 (68%)
npr1bXP_009290669.2 Periplasmic_Binding_Protein_type1 50..453 CDD:471960 91/461 (20%)
PK_GC-A_B 544..818 CDD:270944 115/285 (40%)
HNOBA <818..872 CDD:462234 28/53 (53%)
CYCc 851..1036 CDD:214485 128/184 (70%)

Return to query results.
Submit another query.