Protein Alignment mtTFB1 and rsmA

DIOPT Version :10

• Sequence 1: NP_648499.1
• Gene: mtTFB1 / 8674019
• FlyBaseID: FBgn0261381
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_414593.1
• Gene: rsmA / 944939
• ECOCYCID: EG10523
• Length: 273
• Species: Escherichia coli
• Alignment Length: 285
• Identity: 80/285 - (28%)
• Similarity: 127/285 - (44%)
• Gaps: 35/285 - (12%)

  Fly    32 ARKQLSQNFLMDERLTDKIVKSAGRIDPR--DLVLEVGPGPGGITRSILRRHPQRLLLVEKDPRF 94
            |||:..||||.|:.:.|.||.:   |:|:  ..::|:|||...:|..:..|..| |.::|.|...
E. coli    11 ARKRFGQNFLNDQFVIDSIVSA---INPQKGQAMVEIGPGLAALTEPVGERLDQ-LTVIELDRDL 71

  Fly    95 GETLQLLKECASP-LNIQFDIHYDDILRFNIEQHIPDTSQRIHLIGNLPFAISTRL---LINWLD 155
            ...||     ..| |..:..|:..|.:.||..:......|.:.:.||||:.|||.|   |.::.|
E. coli    72 AARLQ-----THPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTD 131

  Fly   156 DLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKP 220
            .:|.           |....|:||..|:.|....:...|||||:|.:...:....:|..||.|.|
E. coli   132 AIAD-----------MHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPP 185

  Fly   221 QVDVGVVKLIP-LKRPKTQLPFHLVERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAE 284
            :||..||:|:| ...|.......::.|:....|:.|:|..|...|.|...|        :.....
E. coli   186 KVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVE--------VLTGMG 242

  Fly   285 VQDTLRPFELTVEQCLRLAEVYSEH 309
            :...:|...::|.|..::|...:|:
E. coli   243 IDPAMRAENISVAQYCQMANYLAEN 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mtTFB1	NP_648499.1	RsmA	26..309	CDD:439801	79/283 (28%)
rsmA	NP_414593.1	RsmA	1..268	CDD:439801	80/285 (28%)