DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB1 and tfb1m

DIOPT Version :9

Sequence 1:NP_648499.1 Gene:mtTFB1 / 8674019 FlyBaseID:FBgn0261381 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_021322908.1 Gene:tfb1m / 767802 ZFINID:ZDB-GENE-060929-1010 Length:354 Species:Danio rerio


Alignment Length:320 Identity:163/320 - (50%)
Similarity:212/320 - (66%) Gaps:12/320 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SGMRLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITR 75
            ||.||||:|||.|::|||.|:|:||||||||:|.|||||||:.||.::... |.||||||||:||
Zfish    13 SGCRLPPLPTIGEIIKLYNLKAQKQLSQNFLLDTRLTDKIVRQAGNLNNAH-VCEVGPGPGGLTR 76

  Fly    76 SILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIP--------DTS 132
            |||:.....||:||||.||...||||.| |:|..|:  |...|||.:.:|:..|        |..
Zfish    77 SILKAGAADLLVVEKDMRFIPGLQLLSE-AAPGRIR--IAQGDILAYKLERRFPANITKTWEDDP 138

  Fly   133 QRIHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSV 197
            ..:|:||||||.:||.|:|.||:.::.|.|.|....|.:|||||:|||||:.|..|..||.||||
Zfish   139 PNLHIIGNLPFNVSTPLIIKWLEQMSNRTGIFMFGRTRLTLTFQKEVAERLTASTGSRQRSRLSV 203

  Fly   198 MSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRRG 262
            |:|..|.....|||||:||||||.||||||...||.:|:.|.||.|||::|::.|..|:|:||||
Zfish   204 MAQYLTTVKSCFTIPGQAFVPKPNVDVGVVHFTPLAQPQIQQPFKLVEKIVKNAFQFRRKHCRRG 268

  Fly   263 YGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYR 322
            .|.|.|...|:|:.|:|...|:|..||||.|:::.:...||:.||:.......:..||:|
Zfish   269 LGMLFPESQRQELTEELLCSADVDPTLRPTEISISEFRALADAYSKLCNENQGLFDYDFR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB1NP_648499.1 ksgA 18..310 CDD:234708 154/299 (52%)
tfb1mXP_021322908.1 ksgA 20..315 CDD:234708 154/298 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593709
Domainoid 1 1.000 240 1.000 Domainoid score I2224
eggNOG 1 0.900 - - E1_COG0030
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9343
Inparanoid 1 1.050 295 1.000 Inparanoid score I2741
OMA 1 1.010 - - QHG52847
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006502
OrthoInspector 1 1.000 - - oto40467
orthoMCL 1 0.900 - - OOG6_105999
Panther 1 1.100 - - LDO PTHR11727
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.760

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