DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB1 and tfb2m

DIOPT Version :9

Sequence 1:NP_648499.1 Gene:mtTFB1 / 8674019 FlyBaseID:FBgn0261381 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001107089.2 Gene:tfb2m / 569468 ZFINID:ZDB-GENE-070521-3 Length:437 Species:Danio rerio


Alignment Length:340 Identity:74/340 - (21%)
Similarity:126/340 - (37%) Gaps:83/340 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QNFLMDERL----TDKIVKSAGRIDPRDLVLEVGPGPGGITRSILRRHPQRLLLVEKDPRFGETL 98
            :.|::|..|    ||.:.:...  |.:.::.|..||||.:||::|.|..||::.:|.|..|   |
Zfish   110 RRFIVDPALATIVTDHLSRDID--DGKAVIFECNPGPGVLTRALLNRGAQRVVALESDANF---L 169

  Fly    99 QLLKECASPLNIQFDIHYDDILRFN---------------------IEQHIPDTSQ-RIHLIGNL 141
            ..|.|..|.|..|.|:.:.|..:.:                     ....:|.|:. .:.::|..
Zfish   170 PELLELESRLEGQLDVVHCDFFKLDPIGNGIMKPPVMYSEKLFSDLAISEVPWTADVPVKIVGLF 234

  Fly   142 PFAISTRLLINWLDDLAARRGAFR--RIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQ---- 200
            .......|:...:.:|..||..||  |::..|.:: |:|..:.:..|...:.....|.::|    
Zfish   235 TQRNERNLMWKMIYNLFERRSIFRYGRVELIMFIS-QKEYTKLVTRPRDYKNYQAFSALAQMAFD 298

  Fly   201 ---VWTEPVMKF---------TIPGKAFVPK---------PQVDVGVVKLIPLKRPKTQLPFHLV 244
               :..||:..|         :..|......         |:.|:....|.||......|     
Zfish   299 IELLHEEPLSSFLTTTNNNRKSASGSTLSQSENLCLVRITPREDLFSSHLTPLNGSTLVL----- 358

  Fly   245 ERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTL----------RPFELTVEQC 299
              :|:...:.|:....:...:..|....|.::...|    :.|||          |.||| :||.
Zfish   359 --MVKQCLAKRKGKLIQQINSWSPGMGSELISNLGF----LDDTLTGDVYPDEYKRLFEL-MEQS 416

  Fly   300 LRLAE--VYSEHLVT 312
            ...||  :|.|.|.|
Zfish   417 GSFAESWLYQETLET 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB1NP_648499.1 ksgA 18..310 CDD:234708 72/336 (21%)
tfb2mNP_001107089.2 P-loop_NTPase 41..>113 CDD:304359 0/2 (0%)
AdoMet_MTases 112..415 CDD:302624 66/320 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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