DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB1 and tfb1m

DIOPT Version :9

Sequence 1:NP_648499.1 Gene:mtTFB1 / 8674019 FlyBaseID:FBgn0261381 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001016494.1 Gene:tfb1m / 549248 XenbaseID:XB-GENE-5721420 Length:346 Species:Xenopus tropicalis


Alignment Length:317 Identity:155/317 - (48%)
Similarity:204/317 - (64%) Gaps:12/317 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSIL 78
            ||||:|||.|::||:.|:|.||||||||:|.:||||||:.||.:. ...|.||||||||||||||
 Frog    11 RLPPLPTIGEIIKLFNLRAEKQLSQNFLLDLKLTDKIVRKAGNLQ-NAYVCEVGPGPGGITRSIL 74

  Fly    79 RRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIP--------DTSQRI 135
            ....:.||:||||.||...|::|.|.:|.   :..|.:.|||.:.:::..|        |....:
 Frog    75 NAGVEELLVVEKDTRFIPGLKMLNEASSG---KVQIVHGDILTYRMDRAFPKHLKKPWDDDPPNV 136

  Fly   136 HLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQ 200
            |:||||||::||.|:|.||:.||.|.|.|....|.||||||:|||||:.|....:||.|||:|:|
 Frog   137 HIIGNLPFSVSTPLIIKWLEQLADRTGPFTYGRTQMTLTFQKEVAERLTASTSSKQRSRLSIMAQ 201

  Fly   201 VWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRRGYGT 265
            ........|||||:||||||:||||||...|..:||.:.||.:||:|||.:|..|:|||..|...
 Frog   202 NLCNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFKVVEKVVRSVFQFRRKYCHHGVSI 266

  Fly   266 LLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYR 322
            |.|.|.|.:..|::.:.|:|..||||.|||:....:|..||.|.....|.:.||::|
 Frog   267 LFPEESRLKCTEQMLRLADVDPTLRPTELTMTHFKKLCNVYREMCDQNPNLFAYNFR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB1NP_648499.1 ksgA 18..310 CDD:234708 147/299 (49%)
tfb1mNP_001016494.1 ksgA 15..310 CDD:234708 146/298 (49%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250 35..38 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 230 1.000 Domainoid score I2416
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9343
Inparanoid 1 1.050 284 1.000 Inparanoid score I2794
OMA 1 1.010 - - QHG52847
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006502
OrthoInspector 1 1.000 - - oto103831
Panther 1 1.100 - - LDO PTHR11727
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2838
SonicParanoid 1 1.000 - - X4149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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