DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB1 and TFB1M

DIOPT Version :9

Sequence 1:NP_648499.1 Gene:mtTFB1 / 8674019 FlyBaseID:FBgn0261381 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_057104.2 Gene:TFB1M / 51106 HGNCID:17037 Length:346 Species:Homo sapiens


Alignment Length:320 Identity:159/320 - (49%)
Similarity:213/320 - (66%) Gaps:12/320 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SGMRLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITR 75
            |..||||:|||||::||.||||.||||||||:|.|||||||:.||.: ....|.|||||||||||
Human     8 STCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNL-TNAYVYEVGPGPGGITR 71

  Fly    76 SILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIPDTSQR------ 134
            |||......||:||||.||...||:|.: |:|..::  |.:.|:|.|.:|:...::.:|      
Human    72 SILNADVAELLVVEKDTRFIPGLQMLSD-AAPGKLR--IVHGDVLTFKVEKAFSESLKRPWEDDP 133

  Fly   135 --IHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSV 197
              :|:||||||::||.|:|.||::::.|.|.|....|.||||||:|||||:.|..|.:||.||||
Human   134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSV 198

  Fly   198 MSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRRG 262
            |:|........|||||:||||||:||||||...||.:||.:.||.|||:||:::|..|:|||.||
Human   199 MAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRG 263

  Fly   263 YGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYR 322
            ...|.|...|.|...:|.:.|::..||||.:|::.....|.:||.:.....|::.||::|
Human   264 LRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQLFAYNFR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB1NP_648499.1 ksgA 18..310 CDD:234708 150/299 (50%)
TFB1MNP_057104.2 ksgA 15..310 CDD:234708 150/298 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157906
Domainoid 1 1.000 233 1.000 Domainoid score I2421
eggNOG 1 0.900 - - E1_COG0030
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9343
Inparanoid 1 1.050 286 1.000 Inparanoid score I2854
Isobase 1 0.950 - 0 Normalized mean entropy S2684
OMA 1 1.010 - - QHG52847
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006502
OrthoInspector 1 1.000 - - oto90022
orthoMCL 1 0.900 - - OOG6_105999
Panther 1 1.100 - - LDO PTHR11727
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2838
SonicParanoid 1 1.000 - - X4149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.740

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