DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB1 and Tfb1m

DIOPT Version :9

Sequence 1:NP_648499.1 Gene:mtTFB1 / 8674019 FlyBaseID:FBgn0261381 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_666186.1 Gene:Tfb1m / 224481 MGIID:2146851 Length:345 Species:Mus musculus


Alignment Length:318 Identity:158/318 - (49%)
Similarity:210/318 - (66%) Gaps:14/318 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDL-VLEVGPGPGGITRSI 77
            ||||:|||||::||:.|:|.||||||||:|.|||||||:.||.:  .|: |.|||||||||||||
Mouse    11 RLPPLPTIREIIKLFGLRAVKQLSQNFLLDLRLTDKIVRKAGSL--ADVYVYEVGPGPGGITRSI 73

  Fly    78 LRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIP--------DTSQR 134
            |..:...||:||||.||...||:|.: |:|..::  |.:.|:|.:.||:..|        |....
Mouse    74 LNANVAELLVVEKDTRFIPGLQMLSD-AAPGKLR--IVHGDVLTYKIEKAFPGNIRRQWEDDPPN 135

  Fly   135 IHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMS 199
            :|:||||||::||.|:|.||::::.:.|.|....|.||||||:|||||:.|..|.:|..|||:|:
Mouse   136 VHIIGNLPFSVSTPLIIKWLENISLKDGPFVYGRTKMTLTFQKEVAERLVATTGSKQHSRLSIMA 200

  Fly   200 QVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRRGYG 264
            |........||||||||||||:||||||.|.||..||.:.||.|||:||::.|..|:|||.||.|
Mouse   201 QYLCNVEHLFTIPGKAFVPKPKVDVGVVHLTPLIEPKIKQPFKLVEKVVQNAFQFRRKYCHRGLG 265

  Fly   265 TLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYR 322
            .|.|...|.|...:|.|.|::..||||..|::.....|.:||.:.....|::..|::|
Mouse   266 MLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSLCDVYRKMCDEDPQLFTYNFR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB1NP_648499.1 ksgA 18..310 CDD:234708 151/300 (50%)
Tfb1mNP_666186.1 ksgA 15..310 CDD:234708 151/299 (51%)
S-adenosyl-L-methionine binding 35..38 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848291
Domainoid 1 1.000 229 1.000 Domainoid score I2477
eggNOG 1 0.900 - - E1_COG0030
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9343
Inparanoid 1 1.050 280 1.000 Inparanoid score I2879
Isobase 1 0.950 - 0 Normalized mean entropy S2684
OMA 1 1.010 - - QHG52847
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006502
OrthoInspector 1 1.000 - - oto93599
orthoMCL 1 0.900 - - OOG6_105999
Panther 1 1.100 - - LDO PTHR11727
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2838
SonicParanoid 1 1.000 - - X4149
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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