DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB1 and E02H1.1

DIOPT Version :10

Sequence 1:NP_648499.1 Gene:mtTFB1 / 8674019 FlyBaseID:FBgn0261381 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_496061.2 Gene:E02H1.1 / 183993 WormBaseID:WBGene00008455 Length:308 Species:Caenorhabditis elegans


Alignment Length:230 Identity:63/230 - (27%)
Similarity:106/230 - (46%) Gaps:39/230 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QNFLMDERLTDKIV-KSAGRIDPRDLVLEVGPGPGGITRSILRRHPQRLLLVEKDPRFGETLQLL 101
            |:.|.:..:.:.|| |||  :...|.|||||||.|.:|..:| ...:.::..|.|||....:: .
 Worm    30 QHILKNPGVVNAIVEKSA--LKATDTVLEVGPGTGNLTVKML-EVAKTVIACEIDPRMIAEVK-K 90

  Fly   102 KECASPLNIQFDIHYDDILR-----FNIEQHIPDTSQRIHLIGNLPFAIST----RLLINWLDDL 157
            :...:||..:..::..|:::     |::            .:.|||:.||:    :||::     
 Worm    91 RVMGTPLQNKLQVNGGDVMKMEWPFFDV------------CVANLPYQISSPFVQKLLLH----- 138

  Fly   158 AARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQV 222
                   |.:.....|.||:|.|:|:.|..|.:...||||..|:..:..|...:....|.|.|:|
 Worm   139 -------RPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKV 196

  Fly   223 DVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQK 257
            |..||::.| |.|...:.|...|.::|..|..:.|
 Worm   197 DSAVVRIAP-KNPPPPVNFVEWEGLLRLCFMRKNK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB1NP_648499.1 RsmA 26..309 CDD:439801 63/230 (27%)
E02H1.1NP_496061.2 PTZ00338 15..306 CDD:240367 63/230 (27%)

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