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Protein Alignment mtTFB1 and Tfb2m

DIOPT Version :9

Sequence 1:	NP_648499.1	Gene:	mtTFB1 / 8674019	FlyBaseID:	FBgn0261381	Length:	330	Species:	Drosophila melanogaster
Sequence 2:	NP_032275.2	Gene:	Tfb2m / 15278	MGIID:	107937	Length:	396	Species:	Mus musculus

Alignment Length:	399	Identity:	86/399 - (21%)
Similarity:	151/399 - (37%)	Gaps:	128/399 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 SGMRLPPMP----------TIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLE 65
            |...:.|:|          |.|...:..|..|.|:.::|.:.|  |.:....|      |.::||
Mouse    44 SDFNIEPLPDSDLEESSPWTSRNRSEPTRHIACKKAARNLVRD--LLEHQNPS------RQIILE 100

  Fly    66 VGPGPGGITRSILRRHPQRLLLVEKDPRFGETLQ-LLKECASPLNI------QFDIHYDDILRFN 123
            ..||||.:|.::|:. ..|::..|.:..|...|: |.:.....|.:      :.|..|.:::|
Mouse   101 CNPGPGILTGALLKA-GARVVAFESEKTFIPHLEPLQRNMDGELQVVHCDFFKMDPRYQEVVR-- 162

  Fly   124 IEQHIPDTSQR------------------IHLIGNLPFAISTRLLINWLDDLAARRGAFR--RID 168
                 ||.|.:                  |.:.|.||:....|:|...|.||.:....:|  |::
Mouse   163 -----PDVSSQAIFQNLGIKAVPWSAGVPIKVFGILPYKHERRILWKILFDLYSCESIYRYGRVE 222

  Fly   169 TCMTLTFQQEVAERICAPVGGEQRCRL-SVMSQVW----------TEPVMKFTI---PGKAFVPK 219
            ..|.:: ::|..:.|..|    :|..| .||:.:|          .||...|::   .|.....|
Mouse   223 LNMFVS-EKEFRKLIATP----KRPDLYQVMAVLWQVACDVKFLHMEPWSSFSVHTENGHLEKSK 282

  Fly   220 PQVDVGVVK----LIPLKRPKT-----------QLPFHLVER--------VVRHIFSMRQ----- 256
            ....|.::|    |:.:...:|           .:.||||:.        ::||:.|:..
Mouse   283 HGESVNLLKQNLYLVRMTPRRTLFTENLSPLNYDIFFHLVKHCFGKRNAPIIRHLRSLSTVDPIN 347

  Fly   257 --KYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAEVYSEHLVTRPEVAAY 319
              :..|:..|         :.|.:::.    .|..:.|| |:||        ||..|.:   ..|
Mouse   348 ILRQIRKNPG---------DTAARMYP----HDFKKLFE-TIEQ--------SEDSVFK---WIY 387

  Fly   320 DYRAPKNVE 328
            || .|:::|
Mouse   388 DY-CPEDME 395

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.