DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfp24F and Colec11

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001300907.1 Gene:Colec11 / 71693 MGIID:1918943 Length:278 Species:Mus musculus


Alignment Length:167 Identity:47/167 - (28%)
Similarity:73/167 - (43%) Gaps:27/167 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IVKLTGSTTFLVALFLFEVSRNVAGALEALQTTNDTFVRIGNSYYLIERKLQKNWFGAYEICRQQ 66
            :.:||....|:         :|...:..|:....:|..:|   |.|:  |.:|.:..|...| |.
Mouse   130 VTQLTTELKFI---------KNALPSPAAVAGVRETESKI---YLLV--KEEKRYADAQLSC-QA 179

  Fly    67 QAELISLETFDELR--LVSEYLLANNIFERYWTSGTDLGTKGKHVWFSNGQPLST-DLWYGGEPN 128
            :...:|:.. ||..  |::.| ||.....|.:....||..:|..| :|:..|:.| :.|..||||
Mouse   180 RGGTLSMPK-DEAANGLMASY-LAQAGLARVFIGINDLEKEGAFV-YSDRSPMQTFNKWRSGEPN 241

  Fly   129 NKNNEEHCDELGSDFRPTKSPGMNDRNCNFESSFICE 165
            |..:||.|.|:      ..|.|.||..|:....|:||
Mouse   242 NAYDEEDCVEM------VASGGWNDVACHITMYFMCE 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 38/122 (31%)
Colec11NP_001300907.1 Collagen 48..99 CDD:460189
CLECT_collectin_like 158..273 CDD:153061 41/130 (32%)
Blue background indicates that the domain is not in the aligned region.

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