DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfp24F and Clec4n

DIOPT Version :10

Sequence 1:NP_001162870.1 Gene:Sfp24F / 8674016 FlyBaseID:FBgn0259958 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_064385.1 Gene:Clec4n / 56620 MGIID:1861231 Length:209 Species:Mus musculus


Alignment Length:126 Identity:38/126 - (30%)
Similarity:59/126 - (46%) Gaps:11/126 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GNSYYLIERKLQKNWFGAYEICRQQQAELISLETFDELRLVSEYLLANNIFERYWTSGTDLGTKG 106
            |:|.|||..| :..|..:.:.|.|..|.|:.:.|..|...:::.|   |....|:...:|....|
Mouse    87 GSSCYLISTK-ENFWSTSEQNCVQMGAHLVVINTEAEQNFITQQL---NESLSYFLGLSDPQGNG 147

  Fly   107 KHVWFSNGQPLSTDL--WYGGEPNNKNNEEHCDELGSDFRPTKSPGMNDRNCNFESSFICE 165
            |..|..: .|.|.::  |:..|||..  ||.|..: ..:.|:|. |.||..|:.:.:.|||
Mouse   148 KWQWIDD-TPFSQNVRFWHPHEPNLP--EERCVSI-VYWNPSKW-GWNDVFCDSKHNSICE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfp24FNP_001162870.1 CLECT 45..165 CDD:153057 34/121 (28%)
Clec4nNP_064385.1 CLECT_DC-SIGN_like 79..204 CDD:153060 38/126 (30%)

Return to query results.
Submit another query.